RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PTGR1Q14914 329 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 RASA2Q15283 850 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ZIC1Q15915 447 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 DPYSL2Q16555 572 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SMN1Q16637 294 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 C2orf68Q2NKX9 166 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 EIF2S3LQ2VIR3 472 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PRTGQ2VWP7 1150 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PARP15Q460N3 678 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 LACTB2Q53H82 288 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ASPHD1Q5U4P2 390 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 GARNL3Q5VVW2 1013 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 GGNBP1Q5YKI7 109 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF626Q68DY1 528 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SIGIRRQ6IA17 410 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PWWP2BQ6NUJ5 590 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 FAM198BQ6UWH4 519 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 CLEC17AQ6ZS10 378 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 Q6ZS92 163 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 Q6ZTK2 550 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SHFQ7M4L6 423 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF367Q7RTV3 350 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 CUZD1Q86UP6 607 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 GKN2Q86XP6 184 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 MMP21Q8N119 569 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SPATA6LQ8N4H0 392 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PQLC3Q8N755 202 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 NANOGP1Q8N7R0 232 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 GPR26Q8NDV2 337 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 FDCSPQ8NFU4 85 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 C9orf43Q8TAL5 461 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 DENND1AQ8TEH3 1009 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 CT55Q8WUE5 264 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 NELFBQ8WX92 580 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PSMF1Q92530 271 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SLC25A28Q96A46 364 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 FAF2Q96CS3 445 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF501Q96CX3 271 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 MSI2Q96DH6 328 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 RRNAD1Q96FB5 475 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PPP1R16AQ96I34 528 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF285Q96NJ3 590 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 FCRL4Q96PJ5 515 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 OR2A14Q96R47 310 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 BAG1Q99933 345 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SLX1AQ9BQ83 275 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ZPBPQ9BS86 351 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM121Q9BTD3 319 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 TRIM62Q9BVG3 475 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 AP1M1Q9BXS5 423 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 TXLNGYQ9BZA5 131 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 HRH4Q9H3N8 390 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ZDHHC6Q9H6R6 413 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 MKKSQ9NPJ1 570 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 LHX9Q9NQ69 397 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 HINT3Q9NQE9 182 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 FAM207AQ9NSI2 230 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SIRT3Q9NTG7 399 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 POT1Q9NUX5 634 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SLC39A1Q9NY26 324 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 OR6C3Q9NZP0 311 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 MARCH4Q9P2E8 410 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 C11orf21Q9P2W6 132 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 OR14J1Q9UGF5 321 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 RWDD2AQ9UIY3 292 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 EXO1Q9UQ84 846 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 CMAHPQ9Y471 501 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 MAGED1Q9Y5V3 778 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 CUBNO60494 3623 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 CROCCQ5TZA2 2017 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PRRC2AP48634 2157 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 MYH10P35580 1976 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 TP53BP1Q12888 1972 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ANK2Q01484 3957 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SVEP1Q4LDE5 3571 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 MXRA5Q9NR99 2828 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 NYNRINQ9P2P1 1898 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SVILO95425 2214 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SYNJ2BP-COX16A0A087WUM0 186 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 A0A0J9YYE9 177 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 hCG_1809904A0A1W2PP81 198 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 A0A1W2PPE2 198 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 A0A1W2PR64 198 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 GLOD5A6NK44 160 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 CGB1A6NKQ9 187 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 A6NL46 340 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 EFCAB7A8K855 629 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 B4DGG1 531 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 C21orf140B9A014 251 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 C19orf84I3L1E1 186 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 VCYO14598 125 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 OGG1O15527 345 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 MED7O43513 233 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 LDB2O43679 373 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 KRT86O43790 486 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 MITFO75030 526 aaPredicted RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SOCS5O75159 536 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 AVILO75366 819 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 LRCH4O75427 683 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms