RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 OR5L2Q8NGL0 311 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 FAM57AQ8TBR7 257 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 ACMSDQ8TDX5 336 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 PAQR8Q8TEZ7 354 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 SELENOMQ8WWX9 145 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 RIT1Q92963 219 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 ADIPOR1Q96A54 375 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 NTNG2Q96CW9 530 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 SPACA9Q96E40 222 aaPredicted RBP12.01□□□□□ -0.49
NPAS3-209ENST00000551008 RBM18Q96H35 190 aaKnown RBP12.01□□□□□ -0.49
NPAS3-209ENST00000551008 ART5Q96L15 291 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 KCNA7Q96RP8 456 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 PELOQ9BRX2 385 aaKnown RBP12.01□□□□□ -0.49
NPAS3-209ENST00000551008 ACPTQ9BZG2 426 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 DEFB127Q9H1M4 99 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 C12orf65Q9H3J6 166 aaKnown RBP12.01□□□□□ -0.49
NPAS3-209ENST00000551008 ELOVL6Q9H5J4 265 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 HEY2Q9UBP5 337 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 SUCOQ9UBS9 1254 aaKnown RBP12.01□□□□□ -0.49
NPAS3-209ENST00000551008 CNOT11Q9UKZ1 510 aaKnown RBP12.01□□□□□ -0.49
NPAS3-209ENST00000551008 PCDHA9Q9Y5H5 950 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 KLF2Q9Y5W3 355 aaPredicted RBP12.01□□□□□ -0.49
NPAS3-209ENST00000551008 CHCHD2Q9Y6H1 151 aaPredicted RBP12.01□□□□□ -0.49
NPAS3-209ENST00000551008 CSMD2Q7Z408 3487 aa12.01□□□□□ -0.49
NPAS3-209ENST00000551008 POLQO75417 2590 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 E9PLN8 166 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 OR10H2O60403 315 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 CDC40O60508 579 aaKnown RBP eCLIP12□□□□□ -0.49
NPAS3-209ENST00000551008 PDE9AO76083 593 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 SUPT7LO94864 414 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 LRATO95237 230 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 IGHG3P01860 377 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 PROCP04070 461 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 FBXO45P0C2W1 286 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 CPMP14384 443 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 ENDOUP21128 410 aaKnown RBP12□□□□□ -0.49
NPAS3-209ENST00000551008 TNFRSF8P28908 595 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 PTGS2P35354 604 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 MAGEA5P43359 124 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 MAPK12P53778 367 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 FOXA1P55317 472 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 ZNF630Q2M218 657 aaPredicted RBP12□□□□□ -0.49
NPAS3-209ENST00000551008 HYAL4Q2M3T9 481 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 CCNYL2Q5T2Q4 361 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 SP5Q6BEB4 398 aaPredicted RBP12□□□□□ -0.49
NPAS3-209ENST00000551008 FAM180BQ6P0A1 224 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 SLC48A1Q6P1K1 146 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 FAM111BQ6SJ93 734 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 RNF111Q6ZNA4 994 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 GPRIN3Q6ZVF9 776 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 LCA5Q86VQ0 697 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 EIF1ADQ8N9N8 165 aaKnown RBP12□□□□□ -0.49
NPAS3-209ENST00000551008 OR10G3Q8NGC4 313 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 PHF10Q8WUB8 498 aaKnown RBP12□□□□□ -0.49
NPAS3-209ENST00000551008 CHTF18Q8WVB6 975 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 CNRIP1Q96F85 164 aaPredicted RBP12□□□□□ -0.49
NPAS3-209ENST00000551008 SGCZQ96LD1 299 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 ZNF681Q96N22 645 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 GAL3ST4Q96RP7 486 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 VKORC1Q9BQB6 163 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 FAM173AQ9BQD7 235 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 MAT2BQ9NZL9 334 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 ZNF639Q9UID6 485 aa12□□□□□ -0.49
NPAS3-209ENST00000551008 PCNX3Q9H6A9 2034 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 IQANK1A0A1B0GTG1 560 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 OR6C76A6NM76 312 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 GSTA1P08263 222 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 RFPL3SP0C7P2 107 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 AGAP20933 346 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 PIK3R1P27986 724 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 HTR1EP28566 365 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 SLCO1A2P46721 670 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 XKP51811 444 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 RASA2Q15283 850 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 LTB4RQ15722 352 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 NTRK2Q16620 822 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 PRSS53Q2L4Q9 553 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 PRICKLE4Q2TBC4 344 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 LGSNQ5TDP6 509 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 PRAMEF20Q5VT98 475 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 DESI1Q6ICB0 168 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 MTFR2Q6P444 385 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 ZYG11AQ6WRX3 759 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 GK5Q6ZS86 529 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 TDRPQ86YL5 185 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 GALNT12Q8IXK2 581 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 SLC34A3Q8N130 599 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 SLC15A4Q8N697 577 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 ACBD4Q8NC06 268 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 C7orf57Q8NEG2 295 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 OR4K14Q8NGD5 310 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 SLC22A8Q8TCC7 542 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 EPS8L3Q8TE67 593 aaKnown RBP11.99□□□□□ -0.49
NPAS3-209ENST00000551008 MARVELD3Q96A59 401 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 CTHRC1Q96CG8 243 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 APIPQ96GX9 242 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 ZNF703Q9H7S9 590 aaPredicted RBP11.99□□□□□ -0.49
NPAS3-209ENST00000551008 ANKZF1Q9H8Y5 726 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 WDR41Q9HAD4 459 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 IL1RL2Q9HB29 575 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms