RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 RBM45Q8IUH3 476 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 PEX5LQ8IYB4 626 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 CFAP206Q8IYR0 622 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 KRT78Q8N1N4 520 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 PLA2G15Q8NCC3 412 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 HCAR2Q8TDS4 363 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 RNF31Q96EP0 1072 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 LRR1Q96L50 414 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF582Q96NG8 517 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 SOSTQ9BQB4 213 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TRAF4Q9BUZ4 470 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 KATNB1Q9BVA0 655 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ACOXLQ9NUZ1 547 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 SEC14L3Q9UDX4 400 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 GSTK1Q9Y2Q3 226 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 SNTNA6NMZ2 147 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 NOTOA8MTQ0 251 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ANHXE9PGG2 379 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 TNFRSF10AO00220 468 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PDPK1O15530 556 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 LILRB5O75023 590 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 CXCL10P02778 98 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 GAAP10253 952 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 XPAP23025 273 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PTBP1P26599 531 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 SMSP52788 366 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PCBP4P57723 403 aaKnown RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 GALK2Q01415 458 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 GINS1Q14691 196 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 Q5BKY6 102 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF805Q5CZA5 627 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 SNAP47Q5SQN1 464 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 SPOUT1Q5T280 376 aaKnown RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 C1orf94Q6P1W5 598 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PODNL1Q6PEZ8 512 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 CD200R1LQ6Q8B3 271 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 LIPIQ6XZB0 460 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 FAM129CQ86XR2 697 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 TMEM25Q86YD3 366 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 IQCF1Q8N6M8 205 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 CELF5Q8N6W0 485 aaKnown RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF740Q8NDX6 193 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 DUSP18Q8NEJ0 188 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 TMEM163Q8TC26 289 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ZFAND1Q8TCF1 268 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 JPH3Q8WXH2 748 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 SMPDL3AQ92484 453 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 UFD1Q92890 307 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 RAB8BQ92930 207 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 TMEM203Q969S6 136 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 TM4SF18Q96CE8 201 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 C1GALT1C1Q96EU7 318 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF764Q96H86 408 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF558Q96NG5 402 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 SORBS1Q9BX66 1292 aaKnown RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF717Q9BY31 904 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 MVB12BQ9H7P6 319 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 SIRT3Q9NTG7 399 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 DKK3Q9UBP4 350 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PCDHGB7Q9Y5F8 929 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 A0A1W2PRU2 124 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 NEDD8-MDP1E9PL57 170 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PLPP1O14494 284 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PRODHO43272 600 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 SH3BP5O60239 455 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 FHP07954 510 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ELFN1P0C7U0 828 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 GSTM3P21266 225 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 MMP11P24347 488 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 GABRA5P31644 462 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 MMP12P39900 470 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 MAP2K3P46734 347 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 MAPK12P53778 367 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 RPS25P62851 125 aaKnown RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 CD83Q01151 205 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 FAPQ12884 760 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PIN1Q13526 163 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 GPR19Q15760 415 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 GPR162Q16538 588 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ENTPD8Q5MY95 495 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PRAMEF14Q5SWL7 426 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PRAMEF13Q5VWM6 474 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ACSM5Q6NUN0 579 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 MZT2BQ6NZ67 158 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 FAM180BQ6P0A1 224 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PLET1Q6UQ28 207 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 LCTLQ6UWM7 567 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ZER1Q7Z7L7 766 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PDZD3Q86UT5 571 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 PLCZ1Q86YW0 608 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ADGRF3Q8IZF5 1079 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 CAMKK1Q8N5S9 505 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 TBC1D19Q8N5T2 526 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ATP6V1C2Q8NEY4 427 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 AUTS2Q8WXX7 1259 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 TM9SF4Q92544 642 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 LRIG1Q96JA1 1093 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 ZFYVE19Q96K21 471 aa9.35□□□□□ -0.91
SMARCD1-205ENST00000548573 TREX2Q9BQ50 279 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms