RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 GABRB3P28472 473 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 CD34P28906 385 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 NKX6-1P78426 367 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-212ENST00000546744 TMEM220Q6QAJ8 160 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 RBPMSQ93062 196 aaKnown RBP12.24□□□□□ -0.45
PTCH1-212ENST00000546744 HERPUD2Q9BSE4 406 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.24□□□□□ -0.45
PTCH1-212ENST00000546744 GFOD1Q9NXC2 390 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 PRSS44E7EML9 344 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 STK25O00506 426 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 SLC22A5O76082 557 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 GJB1P08034 283 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 RPS17P08708 135 aaKnown RBP12.24□□□□□ -0.45
PTCH1-212ENST00000546744 CDK2P24941 298 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 CCND3P30281 292 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-212ENST00000546744 KCNQ1P51787 676 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 ERVK-25P63136 954 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 TAZQ16635 292 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 LRRC26Q2I0M4 334 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 UGT3A2Q3SY77 523 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 MS4A13Q5J8X5 152 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 CD276Q5ZPR3 534 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 EID2Q8N6I1 236 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 FAM86B1Q8N7N1 296 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 C7orf57Q8NEG2 295 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 OR2L8Q8NGY9 312 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 ZFAND1Q8TCF1 268 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 HCAR2Q8TDS4 363 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 DPF3Q92784 378 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 ATP1B2P14415 290 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-212ENST00000546744 OXTRP30559 389 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 TAS2R50P59544 299 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 BTN1A1Q13410 526 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 PEA15Q15121 130 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 SSX2Q16385 188 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 TCEAL6Q6IPX3 200 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 ENPP7Q6UWV6 458 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 DLK2Q6UY11 383 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 FAM122BQ7Z309 247 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF550Q7Z398 422 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 PXKQ7Z7A4 578 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 JAGN1Q8N5M9 183 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 C3orf58Q8NDZ4 430 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 TMEM185AQ8NFB2 350 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 BTF3L4Q96K17 158 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 FIZ1Q96SL8 496 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 SLC38A1Q9H2H9 487 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 NDOR1Q9UHB4 597 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 EP400Q96L91 3159 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 A0A1W2PPL8 197 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 RBMXL2O75526 392 aaKnown RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 USP2O75604 605 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 CELF2O95319 508 aaKnown RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 TSPAN15O95858 294 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 DBIP07108 87 aaKnown RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 GCGRP47871 477 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 CBFBQ13951 182 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 BTG3Q14201 252 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 FBXL22Q6P050 247 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 KCTD9Q7L273 389 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 B3GNT8Q7Z7M8 397 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 OR2AJ1Q8NGZ0 328 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 TRMT10AQ8TBZ6 339 aaKnown RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 FANK1Q8TC84 345 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 SSX3Q99909 188 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 EIF5A2Q9GZV4 153 aaKnown RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 IGSF5Q9NSI5 407 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 IMP3Q9NV31 184 aaKnown RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 SCML2Q9UQR0 700 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 KIAA1551Q9HCM1 1747 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 MYH11P35749 1972 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 WASHC1A8K0Z3 465 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 FMO6PO60774 539 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 IFNA10P01566 189 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 IFNA4P05014 189 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 RAB40ALP0C0E4 278 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 CLCN7P51798 805 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 ATXN7L3Q14CW9 347 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 BAK1Q16611 211 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 TOR1AIP1Q5JTV8 583 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 ADGRF1Q5T601 910 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 CEP68Q76N32 757 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF101Q8IZC7 436 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 DBF4BQ8NFT6 615 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 RAB40AQ8WXH6 277 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 CFAP97Q9P2B7 532 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 KLHL42Q9P2K6 505 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 SIX4Q9UIU6 781 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 WDR45Q9Y484 360 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 LRRC37AA6NMS7 1700 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 LOC100509620A0A075B734 347 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 H3BUI4 141 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 PDHXO00330 501 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 ADH1CP00326 375 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 KLK1P06870 262 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 WEE1P30291 646 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 ADARB1P78563 741 aaKnown RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 POU4F3Q15319 338 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 NDUFAF5Q5TEU4 345 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms