RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TGFB1P01137 390 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 CATP04040 527 aaKnown RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 TP53P04637 393 aaPredicted RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 HMGA1P17096 107 aaKnown RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 POLR2CP19387 275 aaPredicted RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 IMPA1P29218 277 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 SPINT3P49223 89 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 PER3P56645 1201 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 SMIM11AP58511 58 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 RPS26P62854 115 aaKnown RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 ALDH6A1Q02252 535 aaKnown RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 ADAM15Q13444 863 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 GINS1Q14691 196 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 TAF12Q16514 161 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 ZNF284Q2VY69 593 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 SLC25A30Q5SVS4 291 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 TNFAIP8L2Q6P589 184 aaPredicted RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 UNC5DQ6UXZ4 953 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 GLRX5Q86SX6 157 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 RBM45Q8IUH3 476 aaKnown RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 IQCF2Q8IXL9 164 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 ZFP41Q8N8Y5 198 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 RNFT2Q96EX2 444 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 TMEM19Q96HH6 336 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 SLC28A3Q9HAS3 691 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 FOLH1BQ9HBA9 442 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 MIEF1Q9NQG6 463 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 ING4Q9UNL4 249 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 NCKAP1Q9Y2A7 1128 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 PRR23AA6NEV1 266 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 OR2AG2A6NM03 316 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 PDPK1O15530 556 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 SH3BP5O60239 455 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 ZNF821O75541 412 aaPredicted RBP13.46□□□□□ -0.25
SRP54-202ENST00000546080 SLC22A5O76082 557 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 SLCO2B1O94956 709 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 ACP2P11117 423 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 SLC11A1P49279 550 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 UBE3AQ05086 875 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 RAB40BQ12829 278 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 SNAPC1Q16533 368 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 DUSP6Q16828 381 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 PRSS53Q2L4Q9 553 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 LRRC73Q5JTD7 316 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 IER5LQ5T953 404 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 SLCO4C1Q6ZQN7 724 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 TAS1R1Q7RTX1 841 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 KLHDC8AQ8IYD2 350 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 OR8H3Q8N146 312 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 HORMAD2Q8N7B1 307 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 OR56A3Q8NH54 315 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 SLC7A13Q8TCU3 470 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 ZNF431Q8TF32 576 aaPredicted RBP13.46□□□□□ -0.25
SRP54-202ENST00000546080 SLC38A5Q8WUX1 472 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 CCDC120Q96HB5 630 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 ZNF354BQ96LW1 612 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 GPR137Q96N19 417 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 HDHD2Q9H0R4 259 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 PPIL3Q9H2H8 161 aaKnown RBP13.46□□□□□ -0.25
SRP54-202ENST00000546080 OR51B5Q9H339 312 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 PIGUQ9H490 435 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 CXorf36Q9H7Y0 433 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 FGF20Q9NP95 211 aaPredicted RBP13.46□□□□□ -0.25
SRP54-202ENST00000546080 TAS2R7Q9NYW3 318 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 HCSTQ9UBK5 93 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 EXOSC1Q9Y3B2 195 aaKnown RBP13.46□□□□□ -0.25
SRP54-202ENST00000546080 ASB4Q9Y574 426 aa13.46□□□□□ -0.25
SRP54-202ENST00000546080 TRDV1A0A1B0GX56 115 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 TMEM202A6NGA9 273 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 QSOX1O00391 747 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 SOD1P00441 154 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 PDGFAP04085 211 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 KLK1P06870 262 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 TSTA3Q13630 321 aaPredicted RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 SLBPQ14493 270 aaKnown RBP eCLIP13.45□□□□□ -0.26
SRP54-202ENST00000546080 FAM205BPQ63HN1 556 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 ACSM5Q6NUN0 579 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 CD200R1LQ6Q8B3 271 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 TEX261Q6UWH6 196 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 MARCH9Q86YJ5 346 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 GHDCQ8N2G8 530 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 LRRC17Q8N6Y2 441 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 MED28Q9H204 178 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 SUV39H2Q9H5I1 410 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 MVB12BQ9H7P6 319 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 A4GALTQ9NPC4 353 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 DMRT3Q9NQL9 472 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 MRPL39Q9NYK5 338 aaKnown RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 ELF5Q9UKW6 265 aaPredicted RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 CLCA2Q9UQC9 943 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 U3KQ87 197 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 HELZP42694 1942 aaKnown RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 KIAA1671Q9BY89 1806 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 SNTNA6NMZ2 147 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 FOXE1O00358 373 aaPredicted RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 SLC19A2O60779 497 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 LATS1O95835 1130 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 IL3P08700 152 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms