RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PRICKLE4Q2TBC4 344 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 LACTB2Q53H82 288 aaPredicted RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ZNF385BQ569K4 471 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 B3GNTL1Q67FW5 361 aaPredicted RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 R3HCC1LQ7Z5L2 792 aaKnown RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 RIMKLAQ8IXN7 391 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 KRTCAP2Q8N6L1 136 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 PPCDCQ96CD2 204 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ART5Q96L15 291 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 BBC3Q96PG8 261 aaPredicted RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 NPAS2Q99743 824 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 CNPPD1Q9BV87 410 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 SLC25A18Q9H1K4 315 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ZBTB20Q9HC78 741 aaPredicted RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ZNF71Q9NQZ8 489 aaPredicted RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 COPS7AQ9UBW8 275 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ATP6V1HQ9UI12 483 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ERVK-19Q9WJR5 959 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 PRKNO60260 465 aaPredicted RBP19.05■□□□□ 0.64
HMGA2-211ENST00000545998 PTGER1P34995 402 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 RPL3P39023 403 aaKnown RBP19.05■□□□□ 0.64
HMGA2-211ENST00000545998 CLDN8P56748 225 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 MAP4K2Q12851 820 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 LTB4RQ15722 352 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 MPEG1Q2M385 716 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 NXNQ6DKJ4 435 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 IGFL2Q6UWQ7 119 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 ISLR2Q6UXK2 745 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 SLC5A8Q8N695 610 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 BBS4Q96RK4 519 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 DEFB126Q9BYW3 111 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 SLAMF7Q9NQ25 335 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 MAT2BQ9NZL9 334 aa19.05■□□□□ 0.64
HMGA2-211ENST00000545998 COL6A6A6NMZ7 2263 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 CLPSP04118 112 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 PRPS1L1P21108 318 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 S1PR1P21453 382 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 MPIP34949 423 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 IDH3AP50213 366 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 AQP5P55064 265 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 FUT7Q11130 342 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 MFAP5Q13361 173 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 ZNF628Q5EBL2 1059 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 FCRLBQ6BAA4 426 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 HSDL2Q6YN16 418 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 ASB18Q6ZVZ8 466 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 ARMC10Q8N2F6 343 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 ADCY4Q8NFM4 1077 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 OR7A2PQ8NGA2 310 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 OR8K3Q8NH51 312 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 CEP70Q8NHQ1 597 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 ZNF675Q8TD23 568 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 CTHRC1Q96CG8 243 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 LMF1Q96S06 567 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 AIG1Q9NVV5 245 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 SH3BP4Q9P0V3 963 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 ZNF639Q9UID6 485 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 TEKT2Q9UIF3 430 aa19.04■□□□□ 0.64
HMGA2-211ENST00000545998 ANKRD28O15084 1053 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 MAN1A2O60476 641 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 ZFAND5O76080 213 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 NTSP30990 170 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 NCBP2P52298 156 aaKnown RBP eCLIP19.03■□□□□ 0.64
HMGA2-211ENST00000545998 SLC37A1P57057 533 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 LSM12Q3MHD2 195 aaKnown RBP19.03■□□□□ 0.64
HMGA2-211ENST00000545998 ACER2Q5QJU3 275 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 C6orf163Q5TEZ5 329 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 FAM111BQ6SJ93 734 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 IGFL3Q6UXB1 125 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 LINC00696Q6ZRV3 163 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 FAM9CQ8IZT9 166 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 LGI4Q8N135 537 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 VWA5B2Q8N398 1253 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 OR9A2Q8NGT5 310 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 NUDT8Q8WV74 236 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 CIDECQ96AQ7 238 aaPredicted RBP19.03■□□□□ 0.64
HMGA2-211ENST00000545998 ZNF354BQ96LW1 612 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 AMDHD1Q96NU7 426 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 EBF4Q9BQW3 602 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 BRINP2Q9C0B6 783 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 GLIPR2Q9H4G4 154 aa19.03■□□□□ 0.64
HMGA2-211ENST00000545998 NUP214P35658 2090 aaPredicted RBP19.03■□□□□ 0.64
HMGA2-211ENST00000545998 TMEM200CA6NKL6 621 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 PDPK1O15530 556 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 PCSK2P16519 638 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 SSTR4P31391 388 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 FRKP42685 505 aaPredicted RBP19.02■□□□□ 0.64
HMGA2-211ENST00000545998 RNF4P78317 190 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 MEP1AQ16819 746 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 TMEM198Q66K66 360 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 RNF111Q6ZNA4 994 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 ACAD11Q709F0 780 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 RPS19BP1Q86WX3 136 aaKnown RBP19.02■□□□□ 0.64
HMGA2-211ENST00000545998 HPS6Q86YV9 775 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 C9orf40Q8IXQ3 194 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 OR7G1Q8NGA0 311 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 SLC39A7Q92504 469 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 COQ8BQ96D53 544 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 CDCP1Q9H5V8 836 aa19.02■□□□□ 0.64
HMGA2-211ENST00000545998 TCF7L2Q9NQB0 619 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms