RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 P2RX6O15547 441 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 KRT86O43790 486 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 EXTL3O43909 919 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 NME2P1O60361 137 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 NOL3O60936 208 aaKnown RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 OR6A2O95222 327 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 NADKO95544 446 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 EZRP15311 586 aaKnown RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 EIF2S2P20042 333 aaKnown RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 ACKR3P25106 362 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 MDH1P40925 334 aaKnown RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 MAGEA4P43358 317 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 CCL11P51671 97 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 KCNK10P57789 538 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 DCDC1P59894 354 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 FKBP1AP62942 108 aaKnown RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 TRA2BP62995 288 aaKnown RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 GABPAQ06546 454 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 SRSF9Q13242 221 aaKnown RBP eCLIP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 GRB14Q14449 540 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 KRT81Q14533 505 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 TRADDQ15628 312 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF74Q16587 644 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 DUSP5Q16690 384 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 IZUMO4Q1ZYL8 232 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 ANKDD1AQ495B1 522 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 HSP90AA5PQ58FG0 334 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 LYPLAL1Q5VWZ2 237 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 NKAIN2Q5VXU1 208 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 TMEM64Q6YI46 380 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 CYP4V2Q6ZWL3 525 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 FCRLAQ7L513 359 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 TRPT1Q86TN4 253 aaKnown RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 ERO1BQ86YB8 467 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF444Q8N0Y2 327 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 FAM89BQ8N5H3 189 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 TEX26Q8N6G2 289 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 MINDY2Q8NBR6 621 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 OR13C5Q8NGS8 318 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 OR2T11Q8NH01 316 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 OR4L1Q8NH43 312 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 DQX1Q8TE96 717 aaKnown RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 SMPDL3AQ92484 453 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 CXorf58Q96LI9 332 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 CCM2Q9BSQ5 444 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 ATG10Q9H0Y0 220 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 SLC52A3Q9NQ40 469 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 HACD3Q9P035 362 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 ELF5Q9UKW6 265 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 ENTPD4Q9Y227 616 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 NEDD4P46934 1319 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 RTL9Q8NET4 1388 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 ABCC12Q96J65 1359 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 BRCA2P51587 3418 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 MYH3P11055 1940 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 A0A087WZ39 114 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 MSGN1A6NI15 193 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 LANCL1O43813 399 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 CYTIPO60759 359 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 TXNDC12O95881 172 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 AK1P00568 194 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 UMODP07911 640 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 SFTPBP07988 381 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 FAM157CP0CG43 387 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 CT45A8P0DMV1 189 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 CT45A9P0DMV2 189 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 FCARP24071 287 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 ITGA3P26006 1051 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 PKLRP30613 574 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 PRKAR2BP31323 418 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 STIP1P31948 543 aaKnown RBP3.58□□□□□ -1.84
SNHG1-222ENST00000545308 SLC1A3P43003 542 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 NLRP11P59045 1033 aaKnown RBP3.58□□□□□ -1.84
SNHG1-222ENST00000545308 GABPB1Q06547 395 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-222ENST00000545308 ARL16Q0P5N6 197 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 FUT7Q11130 342 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 CNTN1Q12860 1018 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 TMEM132DQ14C87 1099 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 HEPACAMQ14CZ8 416 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 ZNF585BQ52M93 769 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 CT45A2Q5DJT8 189 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 CMPK2Q5EBM0 449 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 PLPP4Q5VZY2 271 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 CES4AQ5XG92 561 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 ZNF324BQ6AW86 544 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-222ENST00000545308 SNRNP48Q6IEG0 339 aaKnown RBP3.58□□□□□ -1.84
SNHG1-222ENST00000545308 TCEAL6Q6IPX3 200 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 SLC25A24Q6NUK1 477 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 SPSB3Q6PJ21 355 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 TRIM65Q6PJ69 517 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 SLC25A47Q6Q0C1 308 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 Q7L0L9 218 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 BNIPLQ7Z465 357 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 SLC43A2Q8N370 569 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 TCEANCQ8N8B7 351 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 LEMD2Q8NC56 503 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 GPR148Q8TDV2 347 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 RAB39BQ96DA2 213 aa3.58□□□□□ -1.84
SNHG1-222ENST00000545308 TRIM44Q96DX7 344 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-222ENST00000545308 DTNBP1Q96EV8 351 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms