RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 CHP2O43745 196 aa5□□□□□ -1.61
USP28-213ENST00000544967 PRKYO43930 277 aa5□□□□□ -1.61
USP28-213ENST00000544967 FMO6PO60774 539 aa5□□□□□ -1.61
USP28-213ENST00000544967 SLC19A2O60779 497 aa5□□□□□ -1.61
USP28-213ENST00000544967 ATP6AP2O75787 350 aa5□□□□□ -1.61
USP28-213ENST00000544967 MT-ND1P03886 318 aa5□□□□□ -1.61
USP28-213ENST00000544967 SNRNP70P08621 437 aaKnown RBP5□□□□□ -1.61
USP28-213ENST00000544967 USP17L7P0C7H9 530 aa5□□□□□ -1.61
USP28-213ENST00000544967 DUX4L2P0CJ85 424 aa5□□□□□ -1.61
USP28-213ENST00000544967 DUX4L3P0CJ86 424 aa5□□□□□ -1.61
USP28-213ENST00000544967 DUX4L4P0CJ87 422 aa5□□□□□ -1.61
USP28-213ENST00000544967 DUX4L5P0CJ88 424 aa5□□□□□ -1.61
USP28-213ENST00000544967 DUX4L6P0CJ89 424 aa5□□□□□ -1.61
USP28-213ENST00000544967 DUX4L7P0CJ90 424 aa5□□□□□ -1.61
USP28-213ENST00000544967 SRFP11831 508 aa5□□□□□ -1.61
USP28-213ENST00000544967 TDGF1P13385 188 aa5□□□□□ -1.61
USP28-213ENST00000544967 TYRP14679 529 aa5□□□□□ -1.61
USP28-213ENST00000544967 POU2F1P14859 743 aa5□□□□□ -1.61
USP28-213ENST00000544967 MAPK3P27361 379 aaPredicted RBP5□□□□□ -1.61
USP28-213ENST00000544967 HOXA6P31267 233 aa5□□□□□ -1.61
USP28-213ENST00000544967 TGFBR1P36897 503 aa5□□□□□ -1.61
USP28-213ENST00000544967 FZD5Q13467 585 aa5□□□□□ -1.61
USP28-213ENST00000544967 GPR33Q49SQ1 333 aa5□□□□□ -1.61
USP28-213ENST00000544967 C1orf185Q5T7R7 199 aa5□□□□□ -1.61
USP28-213ENST00000544967 RTL4Q6ZR62 310 aa5□□□□□ -1.61
USP28-213ENST00000544967 CBLL1Q75N03 491 aa5□□□□□ -1.61
USP28-213ENST00000544967 ZNF605Q86T29 641 aa5□□□□□ -1.61
USP28-213ENST00000544967 NAXDQ8IW45 347 aa5□□□□□ -1.61
USP28-213ENST00000544967 BBS7Q8IWZ6 715 aa5□□□□□ -1.61
USP28-213ENST00000544967 TIGD4Q8IY51 512 aa5□□□□□ -1.61
USP28-213ENST00000544967 FAM86B1Q8N7N1 296 aa5□□□□□ -1.61
USP28-213ENST00000544967 ZNF557Q8N988 423 aaPredicted RBP5□□□□□ -1.61
USP28-213ENST00000544967 C19orf18Q8NEA5 215 aa5□□□□□ -1.61
USP28-213ENST00000544967 SRFBP1Q8NEF9 429 aaKnown RBP5□□□□□ -1.61
USP28-213ENST00000544967 TEX37Q96LM6 180 aa5□□□□□ -1.61
USP28-213ENST00000544967 CD244Q9BZW8 370 aa5□□□□□ -1.61
USP28-213ENST00000544967 ZNF436Q9C0F3 470 aaPredicted RBP5□□□□□ -1.61
USP28-213ENST00000544967 MIXL1Q9H2W2 232 aa5□□□□□ -1.61
USP28-213ENST00000544967 REEP1Q9H902 201 aa5□□□□□ -1.61
USP28-213ENST00000544967 NMUR1Q9HB89 426 aa5□□□□□ -1.61
USP28-213ENST00000544967 TLR8Q9NR97 1041 aaKnown RBP5□□□□□ -1.61
USP28-213ENST00000544967 GRHPRQ9UBQ7 328 aa5□□□□□ -1.61
USP28-213ENST00000544967 FAM8A1Q9UBU6 413 aa5□□□□□ -1.61
USP28-213ENST00000544967 DUX4Q9UBX2 424 aa5□□□□□ -1.61
USP28-213ENST00000544967 PCOLCE2Q9UKZ9 415 aa5□□□□□ -1.61
USP28-213ENST00000544967 TMEM5Q9Y2B1 443 aa5□□□□□ -1.61
USP28-213ENST00000544967 FIS1Q9Y3D6 152 aa5□□□□□ -1.61
USP28-213ENST00000544967 TMEM82A0PJX8 343 aa5□□□□□ -1.61
USP28-213ENST00000544967 IRGMA1A4Y4 181 aa5□□□□□ -1.61
USP28-213ENST00000544967 F8W036 122 aa5□□□□□ -1.61
USP28-213ENST00000544967 PPP6CO00743 305 aa5□□□□□ -1.61
USP28-213ENST00000544967 PRRG1O14668 218 aa5□□□□□ -1.61
USP28-213ENST00000544967 CCL16O15467 120 aa5□□□□□ -1.61
USP28-213ENST00000544967 COCHO43405 550 aa5□□□□□ -1.61
USP28-213ENST00000544967 AKR7A2O43488 359 aa5□□□□□ -1.61
USP28-213ENST00000544967 GPX5O75715 221 aa5□□□□□ -1.61
USP28-213ENST00000544967 SC5DO75845 299 aa5□□□□□ -1.61
USP28-213ENST00000544967 APOL3O95236 402 aa5□□□□□ -1.61
USP28-213ENST00000544967 DHFRP00374 187 aa5□□□□□ -1.61
USP28-213ENST00000544967 MT-CO1P00395 513 aa5□□□□□ -1.61
USP28-213ENST00000544967 GLAP06280 429 aa5□□□□□ -1.61
USP28-213ENST00000544967 FGF2P09038 288 aa5□□□□□ -1.61
USP28-213ENST00000544967 C6P13671 934 aa5□□□□□ -1.61
USP28-213ENST00000544967 ZNF250P15622 560 aa5□□□□□ -1.61
USP28-213ENST00000544967 UGT2B7P16662 529 aa5□□□□□ -1.61
USP28-213ENST00000544967 ZNF37AP17032 561 aaPredicted RBP5□□□□□ -1.61
USP28-213ENST00000544967 FGF9P31371 208 aaPredicted RBP5□□□□□ -1.61
USP28-213ENST00000544967 GPC1P35052 558 aa5□□□□□ -1.61
USP28-213ENST00000544967 EIF1AXP47813 144 aaKnown RBP5□□□□□ -1.61
USP28-213ENST00000544967 HSPA7P48741 367 aa5□□□□□ -1.61
USP28-213ENST00000544967 CXCR3P49682 368 aa5□□□□□ -1.61
USP28-213ENST00000544967 CARD18P57730 90 aa5□□□□□ -1.61
USP28-213ENST00000544967 SNRPGP62308 76 aaKnown RBP5□□□□□ -1.61
USP28-213ENST00000544967 PDGFRLQ15198 375 aa5□□□□□ -1.61
USP28-213ENST00000544967 TSNQ15631 228 aaKnown RBP5□□□□□ -1.61
USP28-213ENST00000544967 SSX1Q16384 188 aa5□□□□□ -1.61
USP28-213ENST00000544967 EML3Q32P44 896 aa5□□□□□ -1.61
USP28-213ENST00000544967 KLHL22Q53GT1 634 aa5□□□□□ -1.61
USP28-213ENST00000544967 PABPC1L2AQ5JQF8 200 aa5□□□□□ -1.61
USP28-213ENST00000544967 NHLRC3Q5JS37 347 aa5□□□□□ -1.61
USP28-213ENST00000544967 SLC25A30Q5SVS4 291 aa5□□□□□ -1.61
USP28-213ENST00000544967 TRIQKQ629K1 86 aa5□□□□□ -1.61
USP28-213ENST00000544967 AFMIDQ63HM1 303 aa5□□□□□ -1.61
USP28-213ENST00000544967 PLAG1Q6DJT9 500 aa5□□□□□ -1.61
USP28-213ENST00000544967 OR7E24Q6IFN5 339 aa5□□□□□ -1.61
USP28-213ENST00000544967 IL27RAQ6UWB1 636 aa5□□□□□ -1.61
USP28-213ENST00000544967 FAM131AQ6UXB0 335 aa5□□□□□ -1.61
USP28-213ENST00000544967 USP45Q70EL2 814 aa5□□□□□ -1.61
USP28-213ENST00000544967 RAB11FIP2Q7L804 512 aa5□□□□□ -1.61
USP28-213ENST00000544967 C16orf62Q7Z3J2 963 aa5□□□□□ -1.61
USP28-213ENST00000544967 GRASPQ7Z6J2 395 aaPredicted RBP5□□□□□ -1.61
USP28-213ENST00000544967 MCATQ8IVS2 390 aaKnown RBP5□□□□□ -1.61
USP28-213ENST00000544967 ADGRF3Q8IZF5 1079 aa5□□□□□ -1.61
USP28-213ENST00000544967 TMEM132CQ8N3T6 1108 aa5□□□□□ -1.61
USP28-213ENST00000544967 TMIEQ8NEW7 156 aa5□□□□□ -1.61
USP28-213ENST00000544967 PROKR2Q8NFJ6 384 aa5□□□□□ -1.61
USP28-213ENST00000544967 OR56B2PQ8NGI1 322 aa5□□□□□ -1.61
USP28-213ENST00000544967 UBA3Q8TBC4 463 aa5□□□□□ -1.61
USP28-213ENST00000544967 UBASH3BQ8TF42 649 aa5□□□□□ -1.61
USP28-213ENST00000544967 ASB13Q8WXK3 278 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms