RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PROSCO94903 275 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 OR6B1O95007 311 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 GASTP01350 101 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 TMIGD3P0DMS9 266 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 VSIG10L2P0DP72 767 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 HNF1AP20823 631 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 MSNP26038 577 aaKnown RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ECHS1P30084 290 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 CCR7P32248 378 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ADRA1AP35348 466 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 CPOXP36551 454 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 BDKRB1P46663 353 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 SLURP1P55000 103 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 NR1H2P55055 460 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 CASP9P55211 416 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 TAS2R40P59535 323 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 KCNJ2P63252 427 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 GAB1Q13480 694 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 TSTA3Q13630 321 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 VMACQ2NL98 169 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 P3H1Q32P28 736 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 DPCR1Q3MIW9 517 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ANKRD20A4Q4UJ75 823 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 GAGE13Q4V321 117 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 AARS2Q5JTZ9 985 aaKnown RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ANKRD20A2Q5SQ80 823 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ANKRD20A1Q5TYW2 823 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ANKRD20A3Q5VUR7 823 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 OPN5Q6U736 354 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 NPNTQ6UXI9 565 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 PRSS41Q7RTY9 318 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 OVCH2Q7RTZ1 564 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF571Q7Z3V5 609 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 LUZP2Q86TE4 346 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 VRK3Q8IV63 474 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 PIANPQ8IYJ0 282 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF567Q8N184 647 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF611Q8N823 705 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 APCDD1LQ8NCL9 501 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ZBTB34Q8NCN2 500 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 NFAM1Q8NET5 270 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 OR5L2Q8NGL0 311 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 OR9A1PQ8NGU1 263 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 PPP1R35Q8TAP8 253 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF480Q8WV37 535 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 IGFBPL1Q8WX77 278 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 RAPGEF5Q92565 580 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 P3H4Q92791 437 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 GCDHQ92947 438 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 CDKN2AIPNLQ96HQ2 116 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 TRIB1Q96RU8 372 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 TBL1YQ9BQ87 522 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 WDR83Q9BRX9 315 aaKnown RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 MED18Q9BUE0 208 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ANGPTL4Q9BY76 406 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 SLC6A15Q9H2J7 730 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 BCO1Q9HAY6 547 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 CLK4Q9HAZ1 481 aaKnown RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 FAM114A2Q9NRY5 505 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 TMEM184CQ9NVA4 438 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 AIPL1Q9NZN9 384 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 UVRAGQ9P2Y5 699 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 TAC3Q9UHF0 121 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 PPIEQ9UNP9 301 aaKnown RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 NAALAD2Q9Y3Q0 740 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 ATG4BQ9Y4P1 393 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 BZW2Q9Y6E2 419 aaKnown RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 URADA6NGE7 173 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 A8MXE2 369 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 MYO1CO00159 1063 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 CCL22O00626 93 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 UBFD1O14562 309 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 SLC16A6O15403 523 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 TCF21O43680 179 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 B4GALT2O60909 372 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF189O75820 626 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 MYO1DO94832 1006 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 TOX4O94842 621 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 RCBTB2O95199 551 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 CATP04040 527 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 JUNP05412 331 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 PRSS56P0CW18 603 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 EGR1P18146 543 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 ATP5DP30049 168 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 FOXN2P32314 431 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 CRHR1P34998 444 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 GCKP35557 465 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 SOX3P41225 446 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 RPL21P46778 160 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 DNASE1L1P49184 302 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 AGFG1P52594 562 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 PNLIPRP1P54315 467 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 EIF3BP55884 814 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 DYNLT1P63172 113 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 VLDLRP98155 873 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 CRYZQ08257 329 aaKnown RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 DUSP8Q13202 625 aa3.72□□□□□ -1.81
SNHG1-220ENST00000544550 MSLNQ13421 630 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 PDCD2Q16342 344 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-220ENST00000544550 RNF151Q2KHN1 245 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms