RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 A0A1W2PPE2 198 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 A0A1W2PR64 198 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 AQP9O43315 295 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 ALDOAP04075 364 aaKnown RBP6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 F3P13726 295 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 IL32P24001 234 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC6A6P31641 620 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 TGFBR2P37173 567 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 ADH7P40394 386 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 MAP3K8P41279 467 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 DIO3P55073 304 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 RCAN2Q14206 197 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 TRAM2Q15035 370 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 ATPAF1Q5TC12 328 aaPredicted RBP6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 MAML2Q8IZL2 1156 aaPredicted RBP6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 SPERTQ8NA61 448 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC22A12Q96S37 553 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 LIN28AQ9H9Z2 209 aaKnown RBP6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 OR6C2Q9NZP2 312 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 TBC1D29Q9UFV1 150 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 PDE10AQ9Y233 779 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 EFCAB9A8MZ26 197 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 SEC14L5O43304 696 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 CACNG3O60359 315 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 CD68P34810 354 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 EVI2BP34910 448 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 KCNC4Q03721 635 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 FADDQ13158 208 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 C5orf22Q49AR2 442 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 LHX8Q68G74 356 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 EPGNQ6UW88 154 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 TMEM107Q6UX40 140 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 HSDL2Q6YN16 418 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 CYS1Q717R9 158 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 RTN4RL1Q86UN2 441 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF100Q8IYN0 542 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC5A8Q8N695 610 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 FAM86B1Q8N7N1 296 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ZSCAN4Q8NAM6 433 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 KCNE4Q8WWG9 221 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ASB9Q96DX5 294 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ADAD1Q96M93 576 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 TOR3AQ9H497 397 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 SACM1LQ9NTJ5 587 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC39A1Q9NY26 324 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 EURLQ9NYK6 297 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 PLD2O14939 933 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 TBX1O43435 398 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 CREG1O75629 220 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 RFPL1O75677 317 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 NADKO95544 446 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 IGFBP1P08833 259 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 PRSS56P0CW18 603 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 OR12D1P0DN82 309 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 BCKDHAP12694 445 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 NPTX1Q15818 432 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 FAM76BQ5HYJ3 339 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 DENND5AQ6IQ26 1287 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 COMTD1Q86VU5 262 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 SPAG16Q8N0X2 631 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ANKFN1Q8N957 763 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 BPIFCQ8NFQ6 507 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 FBXL8Q96CD0 374 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 HSH2DQ96JZ2 352 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 NODALQ96S42 347 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 UHRF1Q96T88 793 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 COPS4Q9BT78 406 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 RNF32Q9H0A6 362 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 PELI2Q9HAT8 420 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ZBTB26Q9HCK0 441 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 NLGN3Q9NZ94 848 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 HS3ST2Q9Y278 367 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 POFUT2Q9Y2G5 429 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 HEMK1Q9Y5R4 338 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 NFS1Q9Y697 457 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 MYH14Q7Z406 1995 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 A6NL46 340 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 AREL1O15033 823 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 SSNA1O43805 119 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 C9P02748 559 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 RLN1P04808 185 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 TSPAN5P62079 268 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ARG2P78540 354 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 PARM1Q6UWI2 310 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 BEND4Q6ZU67 534 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 PAQR9Q6ZVX9 377 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ALDH16A1Q8IZ83 802 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 OR4C15Q8NGM1 316 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 OR56A3Q8NH54 315 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 MCFD2Q8NI22 146 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 CEP76Q8TAP6 659 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 UFD1Q92890 307 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 IL4I1Q96RQ9 567 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 CADM1Q9BY67 442 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 POLDIP3Q9BY77 421 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC9B1P1A6NJY1 282 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 VSTM2BA6NLU5 285 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF84P51523 738 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 CLRN1P58418 232 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms