RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 MVDP53602 400 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 ARSFP54793 590 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 DUSP2Q05923 314 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 SLC34A1Q06495 639 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 DDX59Q5T1V6 619 aaKnown RBP eCLIP26.1■■□□□ 1.77
CCM2-218ENST00000541586 GARNL3Q5VVW2 1013 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 OR52E8Q6IFG1 317 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 ANGPTL8Q6UXH0 198 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 PSMA8Q8TAA3 256 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 SUN3Q8TAQ9 357 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 PRDM9Q9NQV7 894 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 SPACA6W5XKT8 324 aa26.1■■□□□ 1.77
CCM2-218ENST00000541586 A0A1W2PS29 197 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 FEN1P39748 380 aaKnown RBP26.09■■□□□ 1.77
CCM2-218ENST00000541586 SESN3P58005 492 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 FAM53BQ14153 422 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 CEBPEQ15744 281 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 RNF111Q6ZNA4 994 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 FIG4Q92562 907 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 NXPE2Q96DL1 559 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 ZNF681Q96N22 645 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 TMEM121BQ9BXQ6 578 aaPredicted RBP26.09■■□□□ 1.77
CCM2-218ENST00000541586 CHST8Q9H2A9 424 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 GIMAP4Q9NUV9 329 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 ANGPTL2Q9UKU9 493 aa26.09■■□□□ 1.77
CCM2-218ENST00000541586 RNF103-CHMP3A0A140T963 221 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 CYR61O00622 381 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 CPNE3O75131 537 aaKnown RBP26.08■■□□□ 1.77
CCM2-218ENST00000541586 GMNNO75496 209 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 CSNK2A2P19784 350 aaPredicted RBP26.08■■□□□ 1.77
CCM2-218ENST00000541586 SHC2P98077 582 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 COX20Q5RI15 118 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 CPZQ66K79 652 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 CCDC116Q8IYX3 515 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 GALNT6Q8NCL4 622 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 OR52N2Q8NGI0 321 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 ZFP28Q8NHY6 868 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 DUS3LQ96G46 650 aaKnown RBP26.08■■□□□ 1.77
CCM2-218ENST00000541586 DPH2Q9BQC3 489 aaPredicted RBP26.08■■□□□ 1.77
CCM2-218ENST00000541586 EPS8L2Q9H6S3 715 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 ASCL3Q9NQ33 180 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 WDR70Q9NW82 654 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 SRPK3Q9UPE1 567 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 ZNF780BQ9Y6R6 833 aa26.08■■□□□ 1.77
CCM2-218ENST00000541586 TCRBV5S2A0A599 114 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 CDRT15L2A8MXV6 281 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 CXCR6O00574 342 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 ADRM1Q16186 407 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 PTOV1Q86YD1 416 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 ZZZ3Q8IYH5 903 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 NSMCE2Q96MF7 247 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 GORASP2Q9H8Y8 452 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 ENAMQ9NRM1 1142 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 THSD1Q9NS62 852 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 MAU2Q9Y6X3 613 aa26.08■■□□□ 1.76
CCM2-218ENST00000541586 MED19A0JLT2 244 aaPredicted RBP26.07■■□□□ 1.76
CCM2-218ENST00000541586 KRT75O95678 551 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 HBQ1P09105 142 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 CRATP43155 626 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 CASP9P55211 416 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 POLE2P56282 527 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 RAB38P57729 211 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 SKP1P63208 163 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 RHBDD2Q6NTF9 364 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 NIPAL1Q6NVV3 410 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 RNF130Q86XS8 419 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 GOLM1Q8NBJ4 401 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 CANT1Q8WVQ1 401 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 SLCO4A1Q96BD0 722 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 SPATA9Q9BWV2 254 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 STOML1Q9UBI4 398 aa26.07■■□□□ 1.76
CCM2-218ENST00000541586 SEC16AO15027 2179 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 CHST10O43529 356 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 NSA2O95478 260 aaKnown RBP26.06■■□□□ 1.76
CCM2-218ENST00000541586 NUDT7P0C024 238 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 SLC7A1P30825 629 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 MPIP34949 423 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 GPC1P35052 558 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 EMP3P54852 163 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 VMACQ2NL98 169 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 SAXO2Q658L1 398 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 TMEM52Q8NDY8 209 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 OR4K14Q8NGD5 310 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 NEURL3Q96EH8 262 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 MMABQ96EY8 250 aaPredicted RBP26.06■■□□□ 1.76
CCM2-218ENST00000541586 MAP4K5Q9Y4K4 846 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 AP4S1Q9Y587 144 aa26.06■■□□□ 1.76
CCM2-218ENST00000541586 DHRS12A0PJE2 317 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 FAM227AF5H4B4 570 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 ETFAP13804 333 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 PTGER1P34995 402 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 OR1D4P47884 311 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 VAC14Q08AM6 782 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 SPDYE7PQ495Y7 208 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 YOD1Q5VVQ6 348 aaPredicted RBP26.05■■□□□ 1.76
CCM2-218ENST00000541586 ERICH5Q6P6B1 374 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 RAD21L1Q9H4I0 556 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 AKIRIN1Q9H9L7 192 aaPredicted RBP26.05■■□□□ 1.76
CCM2-218ENST00000541586 A0A1B0GX78 115 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 MEN1O00255 615 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms