RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CAPZA2P47755 286 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 SLC9A3P48764 834 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 RPIAP49247 311 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 BTG1P62324 171 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 YBX1P67809 324 aaKnown RBP9.89□□□□□ -0.83
CHFR-219ENST00000541341 PSPHP78330 225 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 RIN1Q13671 783 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 ZNF234Q14588 700 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 SPHARQ15513 63 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 MED22Q15528 200 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 COL28A1Q2UY09 1125 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 BCL7AQ4VC05 210 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 PLEKHS1Q5SXH7 462 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 GPRC6AQ5T6X5 926 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 ARMC12Q5T9G4 340 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 CPTPQ5TA50 214 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 MFSD4BQ5TF39 518 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 TRIQKQ629K1 86 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 FRG2Q64ET8 278 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 OR4F3Q6IEY1 312 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 CASP12Q6UXS9 341 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 VASH1Q7L8A9 365 aaPredicted RBP9.89□□□□□ -0.83
CHFR-219ENST00000541341 ADIPOR2Q86V24 386 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 SPERTQ8NA61 448 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 DCAF4L2Q8NA75 395 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 DUSP18Q8NEJ0 188 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 OR8J1Q8NGP2 316 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 GOT1L1Q8NHS2 421 aaPredicted RBP9.89□□□□□ -0.83
CHFR-219ENST00000541341 CYB5D2Q8WUJ1 264 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 APH1BQ8WW43 257 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 RADILQ96JH8 1075 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 CDK15Q96Q40 435 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 FRG2BQ96QU4 278 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 PIP5K1AQ99755 562 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 DUSP26Q9BV47 211 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 TAPBPLQ9BX59 468 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 SLC12A9Q9BXP2 914 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 TNKS2Q9H2K2 1166 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 RANBP3Q9H6Z4 567 aaPredicted RBP9.89□□□□□ -0.83
CHFR-219ENST00000541341 GAREM1Q9H706 876 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 TPT1P8Q9HAU6 139 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 ABCB8Q9NUT2 735 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 GIMAP4Q9NUV9 329 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 ACOXLQ9NUZ1 547 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 DNAJC11Q9NVH1 559 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 SIRT5Q9NXA8 310 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 ARL15Q9NXU5 204 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 TAS2R7Q9NYW3 318 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 VPS29Q9UBQ0 182 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 NDOR1Q9UHB4 597 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 KLF15Q9UIH9 416 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 ZNF106Q9H2Y7 1883 aaKnown RBP9.89□□□□□ -0.83
CHFR-219ENST00000541341 PKD1L2Q7Z442 2459 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 ZFYVE26Q68DK2 2539 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 A0A0D9SEW6 157 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 A0A1B0GVT2 93 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 TUBAL3A6NHL2 446 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 hCG_2039718K7EN88 272 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 MYL12BO14950 172 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 TAPBPO15533 448 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 CHST10O43529 356 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 SLC19A2O60779 497 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 SLC43A1O75387 559 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 GJB3O75712 270 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 SLC25A14O95258 325 aaPredicted RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 ZIC2O95409 532 aaPredicted RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 HLA-DQB1P01920 261 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 EPHX1P07099 455 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 NR2F6P10588 404 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 PEPDP12955 493 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 GABRB1P18505 474 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 SDC1P18827 310 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 MZF1P28698 734 aaPredicted RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 CSKP41240 450 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 GSTM5P46439 218 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 IDH2P48735 452 aaKnown RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 CSNK1EP49674 416 aaKnown RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 TPMTP51580 245 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 CRISP1P54107 249 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 P2RX3P56373 397 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 KCNJ10P78508 379 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 VLDLRP98155 873 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 ALDH6A1Q02252 535 aaKnown RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 ACSM2AQ08AH3 577 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 FAPQ12884 760 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 ARHGEF7Q14155 803 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 OCLNQ16625 522 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 KLHL12Q53G59 568 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 ESCO2Q56NI9 601 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 CRB2Q5IJ48 1285 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 CEP78Q5JTW2 689 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 WDR45BQ5MNZ6 344 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 GCNT6Q5T4J0 391 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 RNF219Q5W0B1 726 aaPredicted RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 ACSM2BQ68CK6 577 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 TMEM215Q68D42 235 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 NCEH1Q6PIU2 408 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 SUSD1Q6UWL2 747 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 FAM131AQ6UXB0 335 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 ZNF438Q7Z4V0 828 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms