RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 C17orf113A0A1B0GUU1 675 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 LINC00854A0A1B0GVQ3 168 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 TLR4O00206 839 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 PI15O43692 258 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 SLITRK5O94991 958 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 CD72P21854 359 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 AZGP1P25311 298 aaKnown RBP11.86□□□□□ -0.51
RNF4-222ENST00000541204 DSTNP60981 165 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 ERVK-21P61565 698 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 AGBL4Q5VU57 503 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 VN1R5Q7Z5H4 357 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 GATAD2AQ86YP4 633 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 LAS2Q8IYD9 372 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 ZNF513Q8N8E2 541 aaPredicted RBP11.86□□□□□ -0.51
RNF4-222ENST00000541204 FBXO15Q8NCQ5 510 aaPredicted RBP11.86□□□□□ -0.51
RNF4-222ENST00000541204 FLCNQ8NFG4 579 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 OR6F1Q8NGZ6 308 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 LINC00615Q96LM1 132 aaPredicted RBP11.86□□□□□ -0.51
RNF4-222ENST00000541204 HDAC8Q9BY41 377 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 SLC6A16Q9GZN6 736 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 SLC25A19Q9HC21 320 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 SNTG1Q9NSN8 517 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 GDE1Q9NZC3 331 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 ZNF221Q9UK13 617 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 N6AMT1Q9Y5N5 214 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 TRPM6Q9BX84 2022 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 A0A075B6Q4 140 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 CSO75390 466 aaKnown RBP11.86□□□□□ -0.51
RNF4-222ENST00000541204 E2F2Q14209 437 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 SEC23BQ15437 767 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 ATAD3CQ5T2N8 411 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 LAX1Q8IWV1 398 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 UBQLNLQ8IYU4 475 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 ASB15Q8WXK1 588 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 COX14Q96I36 57 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 MYADMQ96S97 322 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 RSPO3Q9BXY4 272 aaPredicted RBP11.86□□□□□ -0.51
RNF4-222ENST00000541204 CXorf36Q9H7Y0 433 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 MYNNQ9NPC7 610 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 MIEF1Q9NQG6 463 aa11.86□□□□□ -0.51
RNF4-222ENST00000541204 IMP3Q9NV31 184 aaKnown RBP11.86□□□□□ -0.51
RNF4-222ENST00000541204 LSM2Q9Y333 95 aaKnown RBP11.86□□□□□ -0.51
RNF4-222ENST00000541204 A8MV72 311 aaPredicted RBP11.85□□□□□ -0.51
RNF4-222ENST00000541204 FOXE1O00358 373 aaPredicted RBP11.85□□□□□ -0.51
RNF4-222ENST00000541204 IDH3BO43837 385 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 SEMA7AO75326 666 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 KRT75O95678 551 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 BCHEP06276 602 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 ZNF24P17028 368 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 KELP23276 732 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 FGL2Q14314 439 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 SPHARQ15513 63 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 BAK1Q16611 211 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 NDUFA5Q16718 116 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 FAM46CQ5VWP2 391 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 KIAA1211LQ6NV74 962 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 ZNF544Q6NX49 715 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 TNFAIP8L2Q6P589 184 aaPredicted RBP11.85□□□□□ -0.51
RNF4-222ENST00000541204 CEACAM20Q6UY09 585 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 C17orf64Q86WR6 236 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 DCUN1D3Q8IWE4 304 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 FERD3LQ96RJ6 166 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 MACROD1Q9BQ69 325 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 NKX2-4Q9H2Z4 354 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 WDR26Q9H7D7 661 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 C3orf14Q9HBI5 128 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 TAAR2Q9P1P5 351 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 REV1Q9UBZ9 1251 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 V9GYH0 126 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 DSPPQ9NZW4 1301 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 ANKDD1BA6NHY2 528 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 H3BN98 237 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 MFN2O95140 757 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 SLC35G4P0C7Q5 338 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 PIPP12273 146 aaPredicted RBP11.85□□□□□ -0.51
RNF4-222ENST00000541204 CSTF2P33240 577 aaKnown RBP eCLIP11.85□□□□□ -0.51
RNF4-222ENST00000541204 RHAGQ02094 409 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 MXD1Q05195 221 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 IRF4Q15306 451 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 REEP3Q6NUK4 255 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 PAQR6Q6TCH4 344 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 ANKRD53Q8N9V6 530 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 JPH3Q8WXH2 748 aaPredicted RBP11.85□□□□□ -0.51
RNF4-222ENST00000541204 KLHL6Q8WZ60 621 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 TP53INP1Q96A56 240 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 TMCO6Q96DC7 493 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 UCK2Q9BZX2 261 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 DDX28Q9NUL7 540 aaKnown RBP11.85□□□□□ -0.51
RNF4-222ENST00000541204 KCND3Q9UK17 655 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 TRAPPC4Q9Y296 219 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 SNX11Q9Y5W9 270 aa11.85□□□□□ -0.51
RNF4-222ENST00000541204 ARRDC5A6NEK1 342 aa11.84□□□□□ -0.51
RNF4-222ENST00000541204 OR52A4PA6NMU1 304 aa11.84□□□□□ -0.51
RNF4-222ENST00000541204 OR10H3O60404 316 aa11.84□□□□□ -0.51
RNF4-222ENST00000541204 HBQ1P09105 142 aa11.84□□□□□ -0.51
RNF4-222ENST00000541204 OSMP13725 252 aa11.84□□□□□ -0.51
RNF4-222ENST00000541204 CRYBB2P43320 205 aa11.84□□□□□ -0.51
RNF4-222ENST00000541204 RFX2P48378 723 aa11.84□□□□□ -0.51
RNF4-222ENST00000541204 GPR50Q13585 617 aa11.84□□□□□ -0.51
RNF4-222ENST00000541204 ZNF79Q15937 498 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms