RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 GALNTL6Q49A17 601 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 HHATQ5VTY9 493 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 RPUSD3Q6P087 351 aaKnown RBP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 RNF111Q6ZNA4 994 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 RNF165Q6ZSG1 346 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 Q6ZSR9 355 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 SLC29A4Q7RTT9 530 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 GALNTL5Q7Z4T8 443 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF227Q86WZ6 799 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 CYP4Z2PQ8N1L4 340 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 LRRC25Q8N386 305 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 VWA5B2Q8N398 1253 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 BCORP1Q8N888 145 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 TMEM178AQ8NBL3 297 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 GALNT11Q8NCW6 608 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 ADCY4Q8NFM4 1077 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 OR8K3Q8NH51 312 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 FAM76AQ8TAV0 307 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 MGARPQ8TDB4 240 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 FAR1Q8WVX9 515 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 ASB15Q8WXK1 588 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 TMEM125Q96AQ2 219 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 CNRIP1Q96F85 164 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 TAAR6Q96RI8 345 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 RASL10BQ96S79 203 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 BRINP2Q9C0B6 783 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 CLMPQ9H6B4 373 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF395Q9H8N7 513 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 TRIM45Q9H8W5 580 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 TMBIM4Q9HC24 238 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 MIEF1Q9NQG6 463 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 HPF1Q9NWY4 346 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 SIRT5Q9NXA8 310 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 ZDHHC2Q9UIJ5 367 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 ERVK-11Q9UQG0 969 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 BSNQ9UPA5 3926 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 ATP6AP2A0A1C7CYW4 349 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 TMEM114B3SHH9 223 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 CDK2AP1O14519 115 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 SKAP2O75563 359 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-215ENST00000540904 ATP6AP2O75787 350 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 OR6B1O95007 311 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 CLPSP04118 112 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 ATP1B1P05026 303 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 CT62P0C5K7 136 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 DDCP20711 480 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 PRPH2P23942 346 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 TACR1P25103 407 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 SOX3P41225 446 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 ABCE1P61221 599 aaKnown RBP8.55□□□□□ -1.04
SNHG1-215ENST00000540904 SRSF11Q05519 484 aaKnown RBP8.55□□□□□ -1.04
SNHG1-215ENST00000540904 DUSP2Q05923 314 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 FUT7Q11130 342 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 STX3Q13277 289 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 KIAA0040Q15053 153 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 PRICKLE4Q2TBC4 344 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 RFTN2Q52LD8 501 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-215ENST00000540904 PIGGQ5H8A4 983 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 FAM71E1Q6IPT2 247 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 SLC25A25Q6KCM7 469 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 FAM111BQ6SJ93 734 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 IL20RBQ6UXL0 311 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 MDGA2Q7Z553 956 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-215ENST00000540904 TICAM1Q8IUC6 712 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 HOMEZQ8IX15 550 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 CCDC116Q8IYX3 515 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 NUBPLQ8TB37 319 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 GFM2Q969S9 779 aaKnown RBP8.55□□□□□ -1.04
SNHG1-215ENST00000540904 TLCD1Q96CP7 247 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 SCMH1Q96GD3 660 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 METTL2AQ96IZ6 378 aaKnown RBP8.55□□□□□ -1.04
SNHG1-215ENST00000540904 EGLN2Q96KS0 407 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 C3orf30Q96M34 536 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF681Q96N22 645 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 GAL3ST4Q96RP7 486 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 BARD1Q99728 777 aaKnown RBP8.55□□□□□ -1.04
SNHG1-215ENST00000540904 WWTR1Q9GZV5 400 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 MYNNQ9NPC7 610 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 SLC35C2Q9NQQ7 365 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 GIMAP4Q9NUV9 329 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 OLAHQ9NV23 265 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 ARGLU1Q9NWB6 273 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-215ENST00000540904 NKIRAS1Q9NYS0 192 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 EHD3Q9NZN3 535 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 ENTPD4Q9Y227 616 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 PCDHGB6Q9Y5F9 930 aa8.55□□□□□ -1.04
SNHG1-215ENST00000540904 C2orf92A0A1B0GVN3 265 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 ANKUB1A6NFN9 424 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 OR6C76A6NM76 312 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 NPIPB8E9PQR5 432 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 NME2P1O60361 137 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF354AO60765 605 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 PEX11AO75192 247 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 ZIC2O95409 532 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 CBX6O95503 412 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 CRYABP02511 175 aaKnown RBP8.54□□□□□ -1.04
SNHG1-215ENST00000540904 PCSK2P16519 638 aa8.54□□□□□ -1.04
SNHG1-215ENST00000540904 SDC1P18827 310 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms