RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SOX11P35716 441 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 FEN1P39748 380 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 CRATP43155 626 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 MAGEA8P43361 318 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 PTDSS1P48651 473 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 CCT3P49368 545 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 XKP51811 444 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 DUSP2Q05923 314 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 ADRM1Q16186 407 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 SPDYE7PQ495Y7 208 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 ANGPTL8Q6UXH0 198 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 SLCO6A1Q86UG4 719 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 RNF130Q86XS8 419 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 GPR135Q8IZ08 494 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 LRRC25Q8N386 305 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 TMEM52Q8NDY8 209 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 FIG4Q92562 907 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 TACO1Q9BSH4 297 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 TMEM38AQ9H6F2 299 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 CCM2LQ9NUG4 571 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 ARMC1Q9NVT9 282 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 C15orf41Q9Y2V0 281 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 AP4S1Q9Y587 144 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 PTPRBP23467 1997 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 DHRS12A0PJE2 317 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 CREG1O75629 220 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 DKK1O94907 266 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 GPR75O95800 540 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 BAG2O95816 211 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 CPMP14384 443 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 PSMA4P25789 261 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 PPP2R1BP30154 601 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 PCGF2P35227 344 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 ARSFP54793 590 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 RBBP4Q09028 425 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 ZNF750Q32MQ0 723 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 COX20Q5RI15 118 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 GCNT6Q5T4J0 391 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 BHLHB9Q6PI77 547 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 RNF111Q6ZNA4 994 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 LRRC74BQ6ZQY2 392 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 C6orf120Q7Z4R8 191 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 ADGRG5Q8IZF4 528 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 C11orf65Q8NCR3 313 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 CANT1Q8WVQ1 401 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 NCLNQ969V3 563 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 FAM162AQ96A26 154 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 SLCO4A1Q96BD0 722 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 MMABQ96EY8 250 aaPredicted RBP13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 CCDC74BQ96LY2 380 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 GFM1Q96RP9 751 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 EFHD1Q9BUP0 239 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 SYNDIG1Q9H7V2 258 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 FGF21Q9NSA1 209 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 OLAHQ9NV23 265 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 HCN3Q9P1Z3 774 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 FAF1Q9UNN5 650 aaPredicted RBP13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 MRPS33Q9Y291 106 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 NUP210LQ5VU65 1888 aa13.38□□□□□ -0.27
CYB561A3-216ENST00000540755 A0A1W2PS29 197 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 D6RAR5 112 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 LOC400499M0QZD8 3231 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 TAF4O00268 1085 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 FGF17O60258 216 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 B4GALT2O60909 372 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 SLITRK5O94991 958 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 IFI6P09912 130 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 NUDT7P0C024 238 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 ETFAP13804 333 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 PORP16435 677 aaPredicted RBP13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 HOXB6P17509 224 aaKnown RBP13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 FOLH1Q04609 750 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 TRA2AQ13595 282 aaKnown RBP eCLIP13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 SLITRK4Q8IW52 837 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 ZNF595Q8IYB9 648 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 PQLC1Q8N2U9 271 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 CATSPER1Q8NEC5 780 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 OR56A1Q8NGH5 318 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 OR9A2Q8NGT5 310 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 RHBDD1Q8TEB9 315 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 TBC1D20Q96BZ9 403 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 ELP4Q96EB1 424 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 SLC35G5Q96KT7 338 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 NDC1Q9BTX1 674 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 ZCCHC3Q9NUD5 404 aaKnown RBP13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 THUMPD1Q9NXG2 353 aaKnown RBP13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 FTSJ1Q9UET6 329 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 ANAPC2Q9UJX6 822 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 CDC14AQ9UNH5 594 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 MAP4K5Q9Y4K4 846 aa13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 COL27A1Q8IZC6 1860 aaPredicted RBP13.37□□□□□ -0.27
CYB561A3-216ENST00000540755 FAM227AF5H4B4 570 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 PLOD2O00469 737 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 CASQ2O14958 399 aaPredicted RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 DSCR3O14972 297 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 ZNF749O43361 778 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 EMC8O43402 210 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 PEX1O43933 1283 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 LDB3O75112 727 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 ATP1B1P05026 303 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms