RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 VMP1Q96GC9 406 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 FBXL20Q96IG2 436 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF681Q96N22 645 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 AGAP4Q96P64 663 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 TSSK3Q96PN8 268 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 NPAS2Q99743 824 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 CXorf21Q9HAI6 301 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 ZBTB20Q9HC78 741 aaPredicted RBP6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 MIEF1Q9NQG6 463 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 TAS2R7Q9NYW3 318 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 NOP53Q9NZM5 478 aaKnown RBP6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 BAIAP2L1Q9UHR4 511 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 G3BP2Q9UN86 482 aaKnown RBP6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 PCDHGB7Q9Y5F8 929 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 CLCA3PQ9Y6N3 262 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 USH1CQ9Y6N9 552 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 FAM208BQ5VWN6 2430 aa6.5□□□□□ -1.37
LPCAT3-209ENST00000540060 CNTRLQ7Z7A1 2325 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 GOLGA8QA0A0J9YX86 632 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 TRBV11-1A0A0K0K1C0 115 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 GOLGA8OA6NCC3 632 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 MYO1GB0I1T2 1018 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 GOLGA8NF8WBI6 632 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SCAMP2O15127 329 aaKnown RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 DYRK3O43781 588 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 PRKNO60260 465 aaPredicted RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 OR10H2O60403 315 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 MAN1A2O60476 641 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 EDF1O60869 148 aaKnown RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 LRATO95237 230 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ALPPP05187 535 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 CT62P0C5K7 136 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 G6PDP11413 515 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SFTPCP11686 197 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 PRPS2P11908 318 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 LBPP18428 481 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 TNNI3P19429 210 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 CSNK2A2P19784 350 aaPredicted RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 PTGER1P34995 402 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 HPCAL1P37235 193 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 FEN1P39748 380 aaKnown RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 CD97P48960 835 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 CLCN2P51788 898 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 DIO3P55073 304 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SLC37A1P57057 533 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 C21orf58P58505 322 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 MGAT2Q10469 447 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 MFAP5Q13361 173 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 LTB4RQ15722 352 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 MPEG1Q2M385 716 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 PRICKLE4Q2TBC4 344 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SLC9B1Q4ZJI4 515 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SOWAHCQ53LP3 525 aaPredicted RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF385BQ569K4 471 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF628Q5EBL2 1059 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 IL23RQ5VWK5 629 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 B3GNTL1Q67FW5 361 aaPredicted RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 FCRLBQ6BAA4 426 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ANKRD26P1Q6NSI1 321 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 IGFL3Q6UXB1 125 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ISLR2Q6UXK2 745 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ASB18Q6ZVZ8 466 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 HPS6Q86YV9 775 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 RIMKLAQ8IXN7 391 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 C9orf40Q8IXQ3 194 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SAMD14Q8IZD0 417 aaPredicted RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 LGI4Q8N135 537 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF675Q8TD23 568 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ACTRT2Q8TDY3 377 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 RIT1Q92963 219 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 GFM2Q969S9 779 aaKnown RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ZDHHC16Q969W1 377 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 MTERF3Q96E29 417 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 RBM18Q96H35 190 aaKnown RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ART5Q96L15 291 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 OR8D2Q9GZM6 311 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SLC25A18Q9H1K4 315 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 CCDC134Q9H6E4 229 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 REEP4Q9H6H4 257 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 WDR55Q9H6Y2 383 aaPredicted RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 KCNK13Q9HB14 408 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SLAMF7Q9NQ25 335 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SLC35C2Q9NQQ7 365 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF71Q9NQZ8 489 aaPredicted RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 GIMAP4Q9NUV9 329 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 MAT2BQ9NZL9 334 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 PTGFRNQ9P2B2 879 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 COPS7AQ9UBW8 275 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 RALYQ9UKM9 306 aaKnown RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 PSME2Q9UL46 239 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ERVK-19Q9WJR5 959 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ENTPD4Q9Y227 616 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 EIF3LQ9Y262 564 aaKnown RBP6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF451Q9Y4E5 1061 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF780BQ9Y6R6 833 aa6.49□□□□□ -1.37
LPCAT3-209ENST00000540060 SPTA1P02549 2419 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 EML6Q6ZMW3 1958 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 TMEM200CA6NKL6 621 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 A8MUI8 341 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 TCP11X1B4DZS4 312 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms