RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SLC9A6Q92581 669 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 MTERF3Q96E29 417 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 QRFPRQ96P65 431 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 TMED9Q9BVK6 235 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 SMG9Q9H0W8 520 aaKnown RBP13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 TMEM245Q9H330 911 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 EGLN3Q9H6Z9 239 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 RBFOX1Q9NWB1 397 aaKnown RBP13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 TESQ9UGI8 421 aaKnown RBP13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 NDOR1Q9UHB4 597 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 C2orf92A0A1B0GVN3 265 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 C5orf58C9J3I9 102 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 C1QBP02746 253 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 NPPBP16860 134 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 MMP11P24347 488 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 DGKGP49619 791 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 ABATP80404 500 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 MAP4K2Q12851 820 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 PDE7AQ13946 482 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 PODNL1Q6PEZ8 512 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 HSDL2Q6YN16 418 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 RASGEF1AQ8N9B8 481 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 C7orf57Q8NEG2 295 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 UCN3Q969E3 161 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 TMEM159Q96B96 161 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 ECHDC3Q96DC8 303 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 RIOK2Q9BVS4 552 aaKnown RBP13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 NARFLQ9H6Q4 476 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 TBC1D17Q9HA65 648 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 DMRT3Q9NQL9 472 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 GULP1Q9UBP9 304 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 KLHL21Q9UJP4 597 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 DIMT1Q9UNQ2 313 aaKnown RBP13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 YIPF1Q9Y548 306 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 KCNE2Q9Y6J6 123 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 ARRDC5A6NEK1 342 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 ARHGEF9O43307 516 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 ELNP15502 786 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 ARSBP15848 533 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 PCSK2P16519 638 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 GAS1P54826 345 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 HSPB3Q12988 150 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 PLK5Q496M5 336 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 Q6ZNB5 142 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 DNAJB7Q7Z6W7 309 aaPredicted RBP13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 ZER1Q7Z7L7 766 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 RASGRP3Q8IV61 690 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 CCDC28AQ8IWP9 274 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 C2orf69Q8N8R5 385 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 GALNT6Q8NCL4 622 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 OR4M2Q8NGB6 313 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 OR56A3Q8NH54 315 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 C2orf15Q8WU43 125 aaKnown RBP13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 MIEF1Q9NQG6 463 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 LEUTXA8MZ59 168 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 ANHXE9PGG2 379 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 SH3BP5O60239 455 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 NME6O75414 186 aaPredicted RBP13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 EPHX1P07099 455 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 GJA1P17302 382 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 FLT3LGP49771 235 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 WNT4P56705 351 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 SNRPD1P62314 119 aaKnown RBP13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 BNC1Q01954 994 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 ELOAQ14241 798 aaKnown RBP13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 SPDYE7PQ495Y7 208 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 SZRD1Q7Z422 152 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 SLC30A8Q8IWU4 369 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 NATD1Q8N6N6 113 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 OVCA2Q8WZ82 227 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 MAGEB10Q96LZ2 347 aaPredicted RBP13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 COQ7Q99807 217 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 STMN3Q9NZ72 180 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 MGAT4BQ9UQ53 548 aa13.19□□□□□ -0.3
SCNN1A-215ENST00000540037 PIPSLA2A3N6 862 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 PRRG1O14668 218 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 RPLP2P05387 115 aaKnown RBP13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 KCNC3Q14003 757 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 SNAPC1Q16533 368 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 SYPL1Q16563 259 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 IQCHQ86VS3 1027 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 PLCZ1Q86YW0 608 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 AUTS2Q8WXX7 1259 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 PDXPQ96GD0 296 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 ACAT2Q9BWD1 397 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 FBXW2Q9UKT8 454 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 PRAMEF27A3QJZ7 478 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 LANCL1O43813 399 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 NOS1APO75052 506 aaPredicted RBP13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 MYL12AP19105 171 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 HLA-FP30511 346 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 MAPK8P45983 427 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 GIPRP48546 466 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 RAB8AP61006 207 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 RRAS2P62070 204 aaPredicted RBP13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 CAP1Q01518 475 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 ZNF33BQ06732 778 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 OCLNQ16625 522 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 ZNF57Q68EA5 555 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms