RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 DUSP8Q13202 625 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 EBPQ15125 230 aaKnown RBP12.7□□□□□ -0.38
CD9-208ENST00000538834 ZNF791Q3KP31 576 aaPredicted RBP12.7□□□□□ -0.38
CD9-208ENST00000538834 SLC25A25Q6KCM7 469 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 NOXRED1Q6NXP6 359 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 GPALPP1Q8IXQ4 340 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 SLC15A4Q8N697 577 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 ST6GALNAC3Q8NDV1 305 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 SUN3Q8TAQ9 357 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 ZNF675Q8TD23 568 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 RIT1Q92963 219 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 ADIPOR1Q96A54 375 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 CLMPQ9H6B4 373 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 LIN28AQ9H9Z2 209 aaKnown RBP12.7□□□□□ -0.38
CD9-208ENST00000538834 MAT2BQ9NZL9 334 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 ARHGAP21Q5T5U3 1957 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 MYO1GB0I1T2 1018 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 ITM2AO43736 263 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 OR2J2O76002 312 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 ZWINTO95229 277 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 ANXA4P09525 319 aaPredicted RBP12.69□□□□□ -0.38
CD9-208ENST00000538834 NEFHP12036 1026 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 EDN3P14138 238 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 H2AFXP16104 143 aaPredicted RBP12.69□□□□□ -0.38
CD9-208ENST00000538834 TNNI3P19429 210 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 CSNK2A2P19784 350 aaPredicted RBP12.69□□□□□ -0.38
CD9-208ENST00000538834 TACR1P25103 407 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 ERVK-8P63133 956 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 ZNF763Q0D2J5 394 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 CASP8Q14790 479 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 RFTN2Q52LD8 501 aaPredicted RBP12.69□□□□□ -0.38
CD9-208ENST00000538834 FHL5Q5TD97 284 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 MDGA2Q7Z553 956 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 SIAH3Q8IW03 269 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 C17orf47Q8NEP4 570 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 OR7G1Q8NGA0 311 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 OR5L2Q8NGL0 311 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 THAP3Q8WTV1 239 aaPredicted RBP12.69□□□□□ -0.38
CD9-208ENST00000538834 NR4A3Q92570 626 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 TP53INP1Q96A56 240 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 FRMD6Q96NE9 622 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 SORT1Q99523 831 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 FAIM2Q9BWQ8 316 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.69□□□□□ -0.38
CD9-208ENST00000538834 EML4Q9HC35 981 aaKnown RBP12.69□□□□□ -0.38
CD9-208ENST00000538834 AGPAT4Q9NRZ5 378 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 C1orf109Q9NX04 203 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 ANKRD10Q9NXR5 420 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 ERVK-19Q9WJR5 959 aa12.69□□□□□ -0.38
CD9-208ENST00000538834 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.69□□□□□ -0.38
CD9-208ENST00000538834 OR6B1O95007 311 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 SNUPNO95149 360 aaKnown RBP12.68□□□□□ -0.38
CD9-208ENST00000538834 RASAL1O95294 804 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 CBX7O95931 251 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 SERPINE1P05121 402 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 IFI6P09912 130 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 CD46P15529 392 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 DDCP20711 480 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 GNLYP22749 145 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 MST1P26927 711 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 SSTR4P31391 388 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 SOX3P41225 446 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 FRKP42685 505 aaPredicted RBP12.68□□□□□ -0.38
CD9-208ENST00000538834 SSR4P51571 173 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 PDE7AQ13946 482 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 ZNF267Q14586 743 aaPredicted RBP12.68□□□□□ -0.38
CD9-208ENST00000538834 HEPACAMQ14CZ8 416 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 ZNF628Q5EBL2 1059 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 FAM111BQ6SJ93 734 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 IKBIPQ70UQ0 350 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 GALNTL5Q7Z4T8 443 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 ATCAYQ86WG3 371 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 NUDCD3Q8IVD9 361 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 GALNT12Q8IXK2 581 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 HORMAD2Q8N7B1 307 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 BCORP1Q8N888 145 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 ZFP62Q8NB50 900 aaPredicted RBP12.68□□□□□ -0.38
CD9-208ENST00000538834 TMEM178AQ8NBL3 297 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 C16orf52Q8NHV5 167 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 TWIST2Q8WVJ9 160 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 ERP27Q96DN0 273 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 PKNOX2Q96KN3 472 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 EGLN2Q96KS0 407 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 C3orf30Q96M34 536 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 CCT7Q99832 543 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 WWTR1Q9GZV5 400 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 ZNF395Q9H8N7 513 aaPredicted RBP12.68□□□□□ -0.38
CD9-208ENST00000538834 SLC35C2Q9NQQ7 365 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 DEPPQ9NTK1 212 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 COPS7AQ9UBW8 275 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 PSME2Q9UL46 239 aa12.68□□□□□ -0.38
CD9-208ENST00000538834 FLNBO75369 2602 aaKnown RBP12.67□□□□□ -0.38
CD9-208ENST00000538834 WIPF3A6NGB9 483 aa12.67□□□□□ -0.38
CD9-208ENST00000538834 GOLGA6L10A6NI86 522 aa12.67□□□□□ -0.38
CD9-208ENST00000538834 TMEM114B3SHH9 223 aa12.67□□□□□ -0.38
CD9-208ENST00000538834 WWP2O00308 870 aa12.67□□□□□ -0.38
CD9-208ENST00000538834 PIP5K1BO14986 540 aa12.67□□□□□ -0.38
CD9-208ENST00000538834 RGS14O43566 566 aa12.67□□□□□ -0.38
CD9-208ENST00000538834 VPS4BO75351 444 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms