RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 MC3RP41968 323 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 XCR1P46094 333 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 RPS6KA3P51812 740 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 HNRNPKP61978 463 aaKnown RBP eCLIP19.21■□□□□ 0.67
DDX55-205ENST00000538744 IL1RL1Q01638 556 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 LASP1Q14847 261 aaKnown RBP19.21■□□□□ 0.67
DDX55-205ENST00000538744 ZNF691Q5VV52 312 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 KRT73Q86Y46 540 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 C19orf47Q8N9M1 422 aaKnown RBP19.21■□□□□ 0.67
DDX55-205ENST00000538744 NUP43Q8NFH3 380 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 GIPC3Q8TF64 312 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 PROX1Q92786 737 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 CSF3RQ99062 836 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 TREX2Q9BQ50 279 aaPredicted RBP19.21■□□□□ 0.67
DDX55-205ENST00000538744 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.21■□□□□ 0.67
DDX55-205ENST00000538744 PRUNE2Q8WUY3 3088 aa19.21■□□□□ 0.67
DDX55-205ENST00000538744 PRAMEF27A3QJZ7 478 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 ZNF860A6NHJ4 632 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 LILRA5A6NI73 299 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 AQP9O43315 295 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 FESP07332 822 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 RHCEP18577 417 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 CXCL12P48061 93 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 XKP51811 444 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 CRISP3P54108 245 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 CDH12P55289 794 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 OLR1P78380 273 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 UBALD2Q8IYN6 164 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 SDR16C5Q8N3Y7 309 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 OR4C15Q8NGM1 316 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 C1orf216Q8TAB5 229 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 BBS10Q8TAM1 723 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 APOBEC4Q8WW27 367 aaKnown RBP19.2■□□□□ 0.66
DDX55-205ENST00000538744 COL21A1Q96P44 957 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 PCDHGA8Q9Y5G5 932 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 GPC6Q9Y625 555 aaPredicted RBP19.2■□□□□ 0.66
DDX55-205ENST00000538744 GALR3O60755 368 aaPredicted RBP19.2■□□□□ 0.66
DDX55-205ENST00000538744 RECKO95980 971 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 PROS1P07225 676 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 ELK4P28324 431 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 YAP1P46937 504 aaKnown RBP19.2■□□□□ 0.66
DDX55-205ENST00000538744 CAPZBP47756 277 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 ALDH3B2P48448 385 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 SIM1P81133 766 aaPredicted RBP19.2■□□□□ 0.66
DDX55-205ENST00000538744 RBM48Q5RL73 367 aaKnown RBP19.2■□□□□ 0.66
DDX55-205ENST00000538744 LGI4Q8N135 537 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 SETD9Q8NE22 299 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 HDAC2Q92769 488 aaKnown RBP19.2■□□□□ 0.66
DDX55-205ENST00000538744 SLC38A3Q99624 504 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 YIPF4Q9BSR8 244 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 BCL2L10Q9HD36 194 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 FAM60AQ9NP50 221 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 SEC14L3Q9UDX4 400 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 NAALAD2Q9Y3Q0 740 aa19.2■□□□□ 0.66
DDX55-205ENST00000538744 CCDC88CQ9P219 2028 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 LMO7DNF2Z398 122 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 DNAJB6O75190 326 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 BCKDHBP21953 392 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 RYKP34925 604 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 POLR2IP36954 125 aaKnown RBP19.19■□□□□ 0.66
DDX55-205ENST00000538744 KCNJ5P48544 419 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 KEAP1Q14145 624 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 LTB4RQ15722 352 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 USP53Q70EK8 1073 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 PRSS41Q7RTY9 318 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 ZNF605Q86T29 641 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 GPR32P1Q8NGA4 272 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 KAT2AQ92830 837 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 ZNF354BQ96LW1 612 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 SPATA5L1Q9BVQ7 753 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 IL21RQ9HBE5 538 aa19.19■□□□□ 0.66
DDX55-205ENST00000538744 DDX18Q9NVP1 670 aaKnown RBP19.19■□□□□ 0.66
DDX55-205ENST00000538744 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 J3KTA2 159 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 ASNA1O43681 348 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 OR6B1O95007 311 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 HLCSP50747 726 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 PUM1Q14671 1186 aaKnown RBP eCLIP19.18■□□□□ 0.665e-7■■■■■ 34.5
DDX55-205ENST00000538744 EXOC3L2Q2M3D2 409 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 PRAMEF8Q5VWM4 474 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 PRAMEF7Q5VXH5 474 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 C17orf82Q86X59 251 aaPredicted RBP19.18■□□□□ 0.66
DDX55-205ENST00000538744 TMEFF1Q8IYR6 380 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 TTC29Q8NA56 475 aaPredicted RBP19.18■□□□□ 0.66
DDX55-205ENST00000538744 CHDHQ8NE62 594 aaPredicted RBP19.18■□□□□ 0.66
DDX55-205ENST00000538744 OR10G2Q8NGC3 310 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 OTUB1Q96FW1 271 aaPredicted RBP19.18■□□□□ 0.66
DDX55-205ENST00000538744 C16orf58Q96GQ5 468 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 OR7D2Q96RA2 312 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 NPLQ9BXD5 320 aaPredicted RBP19.18■□□□□ 0.66
DDX55-205ENST00000538744 TMEM74BQ9NUR3 256 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 NTMQ9P121 344 aa19.18■□□□□ 0.66
DDX55-205ENST00000538744 SLC9B1P1A6NJY1 282 aa19.17■□□□□ 0.66
DDX55-205ENST00000538744 K7ESF4 209 aa19.17■□□□□ 0.66
DDX55-205ENST00000538744 GADD45GO95257 159 aa19.17■□□□□ 0.66
DDX55-205ENST00000538744 ANXA8P13928 327 aa19.17■□□□□ 0.66
DDX55-205ENST00000538744 CPMP14384 443 aa19.17■□□□□ 0.66
DDX55-205ENST00000538744 ETS2P15036 469 aa19.17■□□□□ 0.66
DDX55-205ENST00000538744 ISL1P61371 349 aa19.17■□□□□ 0.66
DDX55-205ENST00000538744 CD47Q08722 323 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms