RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 PDE5AO76074 875 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ALBP02768 609 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZCCHC18P0CG32 403 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZNF28P17035 718 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC5A2P31639 672 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SOX11P35716 441 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 HNRNPFP52597 415 aaKnown RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PCBP4P57723 403 aaKnown RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR4D2P58180 307 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MTPNP58546 118 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZNF267Q14586 743 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MLC1Q15049 377 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZNHIT3Q15649 155 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PRSS53Q2L4Q9 553 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 RUNDC3AQ59EK9 446 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FAM199XQ6PEV8 388 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 C6orf120Q7Z4R8 191 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZC3H7AQ8IWR0 971 aaKnown RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GALNT12Q8IXK2 581 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ST13P4Q8IZP2 240 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CACTIN-AS1Q8N1I8 211 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FBXW8Q8N3Y1 598 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ESX1Q8N693 406 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 IL22RA1Q8N6P7 574 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 RNF148Q8N7C7 305 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC38A9Q8NBW4 561 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TMEM52Q8NDY8 209 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NUP43Q8NFH3 380 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR8J3Q8NGG0 315 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DOK4Q8TEW6 326 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ADAMTS14Q8WXS8 1223 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 KIAA1143Q96AT1 154 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FKBP10Q96AY3 582 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ANKRD9Q96BM1 317 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ART5Q96L15 291 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LRFN5Q96NI6 719 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CNPPD1Q9BV87 410 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CHST8Q9H2A9 424 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TPT1P8Q9HAU6 139 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ENAMQ9NRM1 1142 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 VAPAQ9P0L0 249 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLAMF8Q9P0V8 285 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CTSFQ9UBX1 484 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 C3orf18Q9UK00 162 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PACSIN3Q9UKS6 424 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CES1P1Q9UKY3 287 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PTRH2Q9Y3E5 179 aaKnown RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TMEM184BQ9Y519 407 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PCDHGA7Q9Y5G6 932 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SPTBP11277 2137 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR2W5A6NFC9 320 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 C17orf105B2RV13 164 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DNAJA2O60884 412 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 COQ9O75208 318 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ALOX12BO75342 701 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLITRK5O94991 958 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 IGHEP01854 428 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MATN1P21941 496 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PTGER1P34995 402 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MC3RP41968 323 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 STT3AP46977 705 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CDK9P50750 372 aaKnown RBP9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CASP9P55211 416 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 EEFSECP57772 596 aaKnown RBP9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LIPEQ05469 1076 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FOXC1Q12948 553 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PUM1Q14671 1186 aaKnown RBP eCLIP9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LTB4RQ15722 352 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GTDC1Q4AE62 458 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 RABL3Q5HYI8 236 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LRIF1Q5T3J3 769 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ATAD3BQ5T9A4 648 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 C1orf146Q5VVC0 180 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 HLA-DQA1Q5Y7H0 255 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DLEU7Q6UYE1 221 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 QSOX2Q6ZRP7 698 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 C10orf67Q8IYJ2 551 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ULK2Q8IYT8 1036 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NLGN4XQ8N0W4 816 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CLEC4FQ8N1N0 589 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NLGN4YQ8NFZ3 816 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR10A6Q8NH74 314 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SFXN5Q8TD22 340 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DAZLQ92904 295 aaKnown RBP9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NCLNQ969V3 563 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CCDC124Q96CT7 223 aaKnown RBP9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ELP4Q96EB1 424 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 AURKBQ96GD4 344 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CADM1Q9BY67 442 aaKnown RBP9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TRIM15Q9C019 465 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CXorf36Q9H7Y0 433 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ADAP2Q9NPF8 381 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC52A3Q9NQ40 469 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 EQTNQ9NQ60 294 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NECTIN3Q9NQS3 549 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PTGFRNQ9P2B2 879 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 COPS7AQ9UBW8 275 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PCDHGA3Q9Y5H0 932 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DNAH14Q0VDD8 3507 aa9.99□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PCNX2A6NKB5 2137 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms