RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CLCQ05315 142 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 FOXO1Q12778 655 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 EMC4Q5J8M3 183 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 TCHHL1Q5QJ38 904 aaPredicted RBP13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 C10orf62Q5T681 223 aaPredicted RBP13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 C6orf163Q5TEZ5 329 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 HLA-DQA1Q5Y7H0 255 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 TMEM211Q6ICI0 200 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 TIFABQ6ZNK6 161 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 GSPT2Q8IYD1 628 aaKnown RBP13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 MMP21Q8N119 569 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 CDYL2Q8N8U2 506 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 PAQR8Q8TEZ7 354 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 JSRP1Q96MG2 331 aaPredicted RBP13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 EXO5Q9H790 373 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 CXorf21Q9HAI6 301 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 PNPLA3Q9NST1 481 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 ZNF225Q9UK10 706 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 ADAM29Q9UKF5 820 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 DLX3O60479 287 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 ERAL1O75616 437 aaKnown RBP13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 FBXO45P0C2W1 286 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 SERPINB3P29508 390 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 PTGER4P35408 488 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 DEKP35659 375 aaKnown RBP13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 HSD17B3P37058 310 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 KIR3DL1P43629 444 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 GALNT1Q10472 559 aaPredicted RBP13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC29A2Q14542 456 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC10A1Q14973 349 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 GXYLT1Q4G148 440 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 UNC50Q53HI1 259 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 ZNF678Q5SXM1 525 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 ZNF585AQ6P3V2 769 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 TRILQ7L0X0 811 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 GDF7Q7Z4P5 450 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 TAGAPQ8N103 731 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 FBXW8Q8N3Y1 598 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 TMEM237Q96Q45 408 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 C1QTNF3Q9BXJ4 246 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 OR10A5Q9H207 317 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 SH2D2AQ9NP31 389 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 TBK1Q9UHD2 729 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 TRPS1Q9UHF7 1281 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 BOKQ9UMX3 212 aaPredicted RBP13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 PCDHA9Q9Y5H5 950 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 CHCHD2Q9Y6H1 151 aaPredicted RBP13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 EML6Q6ZMW3 1958 aa13.16□□□□□ -0.3
RTN3P1-201ENST00000536295 FAM90A27PA6NNH2 459 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 MANBAO00462 879 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 GUCY1B2O75343 617 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 IGHG3P01860 377 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 RFPL3SP0C7P2 107 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 CPMP14384 443 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 PORP16435 677 aaPredicted RBP13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 ATP5F1P24539 256 aaPredicted RBP13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 FEN1P39748 380 aaKnown RBP13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 ALDH9A1P49189 494 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 MAN2A2P49641 1150 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 PMPCAQ10713 525 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 TBL3Q12788 808 aaKnown RBP13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 HYAL4Q2M3T9 481 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 FAM180BQ6P0A1 224 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC48A1Q6P1K1 146 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 GPRIN3Q6ZVF9 776 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 CCDC71Q8IV32 467 aaPredicted RBP13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 DND1Q8IYX4 353 aaKnown RBP13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 PRR22Q8IZ63 422 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 C1orf52Q8N6N3 182 aaKnown RBP13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 ZNF441Q8N8Z8 693 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 MYRIPQ8NFW9 859 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 RND1Q92730 232 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 DOHHQ9BU89 302 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 BRINP2Q9C0B6 783 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 BRF2Q9HAW0 419 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 ZFP64Q9NPA5 681 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 NMRK1Q9NWW6 199 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 PSMC3IPQ9P2W1 217 aaPredicted RBP13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 ACAD8Q9UKU7 415 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 RNF6Q9Y252 685 aa13.15□□□□□ -0.3
RTN3P1-201ENST00000536295 TRGV5A0A0B4J1U4 118 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 C1orf226A1L170 272 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 OR14I1A6ND48 311 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 GOLGA6L10A6NI86 522 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 ENO4A6NNW6 628 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 AQP7O14520 342 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 BCKDKO14874 412 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 ESRRBO95718 433 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 KRT6AP02538 564 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 KRT6BP04259 564 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 PYGBP11216 843 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 CHN1P15882 459 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 HMOX2P30519 316 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 KRT6CP48668 564 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 NUP107P57740 925 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 FBXW4P57775 412 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 FUT7Q11130 342 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms