RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 DISC1C4P0D8 188 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CACNB4O00305 520 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 CLDN4O14493 209 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 GPR171O14626 319 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 FPGTO14772 594 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PPEF2O14830 753 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SLC31A2O15432 143 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ARPC5O15511 151 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 VPS26AO75436 327 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CRCPO75575 148 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 MED6O75586 246 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TSPAN12O95859 305 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 DHFRP00374 187 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 HPRP00739 348 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 HLA-DOAP06340 250 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 FBP1P09467 338 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 HIST1H2AGP0C0S8 130 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 PRKAR1AP10644 381 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TPSB2P20231 275 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 HIST1H2ADP20671 130 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 S100PP25815 95 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 HTR1EP28566 365 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 RFC3P40938 356 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CHRNA4P43681 627 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 AGTR2P50052 363 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 C21orf58P58505 322 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 RAB10P61026 200 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 VLDLRP98155 873 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 EMX2Q04743 252 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 IFRD2Q12894 506 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 NPRL3Q12980 569 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SLC14A1Q13336 389 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PWP1Q13610 501 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 HABP2Q14520 560 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 SLC9A5Q14940 896 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PON3Q15166 354 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ANGPT1Q15389 498 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TPSAB1Q15661 275 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 IRAK1BP1Q5VVH5 260 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ANKS6Q68DC2 871 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 HIST2H2AA3Q6FI13 130 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 MACC1Q6ZN28 852 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 Q6ZTK2 550 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 RAB44Q7Z6P3 723 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 CARFQ8N187 725 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 KRT78Q8N1N4 520 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 DNAJC22Q8N4W6 341 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 WDSUB1Q8N9V3 476 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 KLHDC9Q8NEP7 349 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 OR52P1PQ8NH57 321 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CREB3L4Q8TEY5 395 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 OTULINQ96BN8 352 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 HIST1H2AHQ96KK5 128 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 LURAP1Q96LR2 239 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TEFMQ96QE5 360 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 F2RL3Q96RI0 385 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TSNAXQ99598 290 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 HIST1H2AJQ99878 128 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ZYG11BQ9C0D3 744 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 RNF32Q9H0A6 362 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 DNTTIP1Q9H147 329 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 OR51J1Q9H342 316 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 MUC13Q9H3R2 512 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 RGS18Q9NS28 235 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ZNF226Q9NYT6 803 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 NTMQ9P121 344 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ZNF624Q9P2J8 865 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 CNTN6Q9UQ52 1028 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 POFUT2Q9Y2G5 429 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CHST2Q9Y4C5 530 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 LOXHD1Q8IVV2 1947 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ARGFXA6NJG6 315 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CLCA1A8K7I4 914 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ERI2A8K979 691 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 FAM227AF5H4B4 570 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 M0QYV0 167 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 AIPO00170 330 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 EEF1E1O43324 174 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 OR10H2O60403 315 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 EFCAB14O75071 495 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 KLHL18O94889 574 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 RASGRP1O95267 797 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TGM6O95932 706 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 GABRB1P18505 474 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ADCYAP1P18509 176 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ACHEP22303 614 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 GIFP27352 417 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SLC1A2P43004 574 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CRYBB2P43320 205 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PITX1P78337 314 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 ZXDBP98169 803 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ELP6Q0PNE2 266 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PTGR1Q14914 329 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TRAM1Q15629 374 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 USF2Q15853 346 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 SLC5A12Q1EHB4 618 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ODF4Q2M2E3 257 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PDZD11Q5EBL8 140 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 BEX5Q5H9J7 111 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SPANXN3Q5MJ09 141 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms