RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ICAM2P13598 275 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 PCSK2P16519 638 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 GPX3P22352 226 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 IL12AP29459 219 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 POLR2JP52435 117 aaKnown RBP16.28■□□□□ 0.2
NXF1-216ENST00000533499 KCNK10P57789 538 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 UBAP2LQ14157 1087 aaKnown RBP16.28■□□□□ 0.2
NXF1-216ENST00000533499 EXOSC7Q15024 291 aaKnown RBP16.28■□□□□ 0.2
NXF1-216ENST00000533499 MPEG1Q2M385 716 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 METTL21CQ5VZV1 264 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 TMEM107Q6UX40 140 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 KIF2BQ8N4N8 673 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 ZNF321PQ8N8H1 164 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 GLB1L3Q8NCI6 653 aaPredicted RBP16.28■□□□□ 0.2
NXF1-216ENST00000533499 MORN4Q8NDC4 146 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 VPS37AQ8NEZ2 397 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 B3GNT7Q8NFL0 401 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 SLC2A12Q8TD20 617 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 TESCQ96BS2 214 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 COQ8BQ96D53 544 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 SENP5Q96HI0 755 aaPredicted RBP16.28■□□□□ 0.2
NXF1-216ENST00000533499 ART5Q96L15 291 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 IMMP1LQ96LU5 166 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 AMDHD1Q96NU7 426 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 OR52E6Q96RD3 313 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 BHLHE41Q9C0J9 482 aaPredicted RBP16.28■□□□□ 0.2
NXF1-216ENST00000533499 CLMPQ9H6B4 373 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 SLAMF7Q9NQ25 335 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 PCDHGB4Q9UN71 923 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 SNX8Q9Y5X2 465 aa16.28■□□□□ 0.2
NXF1-216ENST00000533499 MED13Q9UHV7 2174 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 FAM234BA2RU67 622 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 SHOX2O60902 331 aaPredicted RBP16.27■□□□□ 0.2
NXF1-216ENST00000533499 ATP1B1P05026 303 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 SSTR4P31391 388 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 SOAT1P35610 550 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 ATP4BP51164 291 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 C21orf58P58505 322 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 Q0VFX4 171 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 AIMP2Q13155 320 aaKnown RBP16.27■□□□□ 0.2
NXF1-216ENST00000533499 DPY19L1Q2PZI1 675 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 COL28A1Q2UY09 1125 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 SPDYE7PQ495Y7 208 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 TIGD2Q4W5G0 525 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 ANXA8L1Q5VT79 327 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 BORAQ6PGQ7 559 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 RNF111Q6ZNA4 994 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 GPR155Q7Z3F1 870 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 VWA5B2Q8N398 1253 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 NFAM1Q8NET5 270 aaPredicted RBP16.27■□□□□ 0.2
NXF1-216ENST00000533499 SUN3Q8TAQ9 357 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 THAP3Q8WTV1 239 aaPredicted RBP16.27■□□□□ 0.2
NXF1-216ENST00000533499 APOBEC4Q8WW27 367 aaKnown RBP16.27■□□□□ 0.2
NXF1-216ENST00000533499 EXTL1Q92935 676 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 VMP1Q96GC9 406 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 ZNF764Q96H86 408 aaPredicted RBP16.27■□□□□ 0.2
NXF1-216ENST00000533499 ARHGAP9Q9BRR9 750 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 NUDT9Q9BW91 350 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 DEFB126Q9BYW3 111 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 ANKRA2Q9H9E1 313 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 MAT2BQ9NZL9 334 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 KCNMB2Q9Y691 235 aa16.27■□□□□ 0.2
NXF1-216ENST00000533499 DMXL2Q8TDJ6 3036 aa16.27■□□□□ 0.19
NXF1-216ENST00000533499 FCHO1O14526 889 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 DDAH2O95865 285 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 SERPINA7P05543 415 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 PGRP06401 933 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 ITGAMP11215 1152 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 MC3RP41968 323 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 CDK9P50750 372 aaKnown RBP16.26■□□□□ 0.19
NXF1-216ENST00000533499 CLCN2P51788 898 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 TERF2Q15554 542 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 TBR1Q16650 682 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 PRICKLE4Q2TBC4 344 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 TRMT12Q53H54 448 aaKnown RBP16.26■□□□□ 0.19
NXF1-216ENST00000533499 GKAP1Q5VSY0 366 aaPredicted RBP16.26■□□□□ 0.19
NXF1-216ENST00000533499 FCRLBQ6BAA4 426 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 PLAG1Q6DJT9 500 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 GK5Q6ZS86 529 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 MTERF4Q7Z6M4 381 aaKnown RBP16.26■□□□□ 0.19
NXF1-216ENST00000533499 CLECL1Q8IZS7 167 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 GALNT16Q8N428 558 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 NATD1Q8N6N6 113 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 SIRT6Q8N6T7 355 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 OR4A15Q8NGL6 344 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 OR1N1Q8NGS0 311 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 M1APQ8TC57 530 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 OR5P2Q8WZ92 322 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 VPS33AQ96AX1 596 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 FBXL20Q96IG2 436 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 GAL3ST4Q96RP7 486 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 DDX18Q9NVP1 670 aaKnown RBP16.26■□□□□ 0.19
NXF1-216ENST00000533499 ARMCX1Q9P291 453 aa16.26■□□□□ 0.19
NXF1-216ENST00000533499 NUP214P35658 2090 aaPredicted RBP16.25■□□□□ 0.19
NXF1-216ENST00000533499 A0A1W2PQ72 361 aa16.25■□□□□ 0.19
NXF1-216ENST00000533499 CCDC154A6NI56 674 aa16.25■□□□□ 0.19
NXF1-216ENST00000533499 CCDC22O60826 627 aa16.25■□□□□ 0.19
NXF1-216ENST00000533499 FAM107AO95990 144 aa16.25■□□□□ 0.19
NXF1-216ENST00000533499 IL6P05231 212 aa16.25■□□□□ 0.19
NXF1-216ENST00000533499 GALNSP34059 522 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms