RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NME2P1O60361 137 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 ZNF354AO60765 605 aaPredicted RBP18.95■□□□□ 0.62
CCS-208ENST00000533244 ERAL1O75616 437 aaKnown RBP18.95■□□□□ 0.62
CCS-208ENST00000533244 SLC25A12O75746 678 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 RASAL1O95294 804 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 LINC00032P0C843 101 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 S1PR1P21453 382 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 NME2P22392 152 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 FEN1P39748 380 aaKnown RBP18.95■□□□□ 0.62
CCS-208ENST00000533244 SLC18A1P54219 525 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 MGAT2Q10469 447 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 MAP4K2Q12851 820 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 EBPQ15125 230 aaKnown RBP18.95■□□□□ 0.62
CCS-208ENST00000533244 CHI3L2Q15782 390 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 PRICKLE4Q2TBC4 344 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 XKR7Q5GH72 579 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 SLC25A25Q6KCM7 469 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 FAM180AQ6UWF9 173 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 RNF111Q6ZNA4 994 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 TMEM156Q8N614 296 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 BCORP1Q8N888 145 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 ZNF615Q8N8J6 731 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 TMEM178AQ8NBL3 297 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 C5orf34Q96MH7 638 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 CLMPQ9H6B4 373 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 ZNF639Q9UID6 485 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 EXO1Q9UQ84 846 aaKnown RBP18.95■□□□□ 0.62
CCS-208ENST00000533244 ASPDHA6ND91 283 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 TMEM114B3SHH9 223 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 PIP5K1BO14986 540 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 ITM2AO43736 263 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 SEC22BO75396 215 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 CBX6O95503 412 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 DDCP20711 480 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 NT5EP21589 574 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 SSTR4P31391 388 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 UQCRFS1P47985 274 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 NR6A1Q15406 480 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 IKBIPQ70UQ0 350 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 CYP4Z2PQ8N1L4 340 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 LRRC25Q8N386 305 aaPredicted RBP18.94■□□□□ 0.62
CCS-208ENST00000533244 DNAJB8Q8NHS0 232 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 AGR3Q8TD06 166 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 CTHRC1Q96CG8 243 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 KLHL1Q9NR64 748 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 RYDENQ9NUL5 291 aaKnown RBP18.94■□□□□ 0.62
CCS-208ENST00000533244 MAT2BQ9NZL9 334 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 ZNF780BQ9Y6R6 833 aa18.94■□□□□ 0.62
CCS-208ENST00000533244 TMEM120BA0PK00 339 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 LYPLA1O75608 230 aaPredicted RBP18.93■□□□□ 0.62
CCS-208ENST00000533244 OR6B1O95007 311 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 NADKO95544 446 aaPredicted RBP18.93■□□□□ 0.62
CCS-208ENST00000533244 GNLYP22749 145 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 GRK2P25098 689 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 TACR1P25103 407 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 SOX3P41225 446 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 TDGF1P3P51864 188 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 WDR4P57081 412 aaKnown RBP18.93■□□□□ 0.62
CCS-208ENST00000533244 MAGOHP61326 146 aaKnown RBP18.93■□□□□ 0.62
CCS-208ENST00000533244 RFTN2Q52LD8 501 aaPredicted RBP18.93■□□□□ 0.62
CCS-208ENST00000533244 PIGGQ5H8A4 983 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 FAM180BQ6P0A1 224 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 GALNTL5Q7Z4T8 443 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 SAMD14Q8IZD0 417 aaPredicted RBP18.93■□□□□ 0.62
CCS-208ENST00000533244 ZNF441Q8N8Z8 693 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 OR7G1Q8NGA0 311 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 PPP1R14CQ8TAE6 165 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 NR4A3Q92570 626 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 CCT7Q99832 543 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 WWTR1Q9GZV5 400 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 SLC35C2Q9NQQ7 365 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 OLAHQ9NV23 265 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 TAS2R7Q9NYW3 318 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 TMED5Q9Y3A6 229 aa18.93■□□□□ 0.62
CCS-208ENST00000533244 A8MVJ9 347 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 SNUPNO95149 360 aaKnown RBP18.92■□□□□ 0.62
CCS-208ENST00000533244 H2AFXP16104 143 aaPredicted RBP18.92■□□□□ 0.62
CCS-208ENST00000533244 ABCE1P61221 599 aaKnown RBP18.92■□□□□ 0.62
CCS-208ENST00000533244 PMP22Q01453 160 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 C2orf80Q0P641 193 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 PRSS53Q2L4Q9 553 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 LYPD8Q6UX82 237 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 SLC29A4Q7RTT9 530 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 DDIASQ8IXT1 998 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 VWA5B2Q8N398 1253 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 ST6GALNAC3Q8NDV1 305 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 ZNF675Q8TD23 568 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 ASB15Q8WXK1 588 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 TMEM125Q96AQ2 219 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 EXOSC8Q96B26 276 aaKnown RBP18.92■□□□□ 0.62
CCS-208ENST00000533244 C20orf27Q9GZN8 174 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 OR10A5Q9H207 317 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 ZNF395Q9H8N7 513 aaPredicted RBP18.92■□□□□ 0.62
CCS-208ENST00000533244 HPF1Q9NWY4 346 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 HAO1Q9UJM8 370 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 POLEQ07864 2286 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 CROCCQ5TZA2 2017 aa18.92■□□□□ 0.62
CCS-208ENST00000533244 CLEC18AA5D8T8 446 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 HSPA4LO95757 839 aa18.91■□□□□ 0.62
CCS-208ENST00000533244 CRYABP02511 175 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms