RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 IGFBP1P08833 259 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 ELAVL4P26378 380 aaKnown RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 GKP32189 559 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 RPL3P39023 403 aaKnown RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 ETV5P41161 510 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 ETV1P50549 477 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 WNT4P56705 351 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 ABATP80404 500 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 FOXD4Q12950 439 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 TPBGQ13641 420 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 PDE7AQ13946 482 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 SEC23BQ15437 767 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 C3orf38Q5JPI3 329 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 TOR2AQ5JU69 321 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 ADNP2Q6IQ32 1131 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 C9orf62Q8N4C0 152 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 NATD1Q8N6N6 113 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 TMEM145Q8NBT3 493 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 OR7G3Q8NG95 312 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 AKAP1Q92667 903 aaKnown RBP eCLIP14.03□□□□□ -0.162e-6■■■□□ 18.5
CAPN1-224ENST00000533129 BHMTQ93088 406 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 WBP2Q969T9 261 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 SLC22A12Q96S37 553 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 SLC23A1Q9UHI7 598 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 MBD1Q9UIS9 605 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 NUP50Q9UKX7 468 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 GSTK1Q9Y2Q3 226 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 SF3B6Q9Y3B4 125 aaKnown RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 PCM1Q15154 2024 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 TRAV19A0A0A6YYK7 116 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 SGK494L7N484 410 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 SH3BGRLO75368 114 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 GSTM1P09488 218 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 IFI30P13284 250 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 FGF9P31371 208 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 ERVFC1P60507 584 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 RPS25P62851 125 aaKnown RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 UBE3AQ05086 875 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 DCST1Q5T197 706 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 ZBTB37Q5TC79 503 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 TMIGD1Q6UXZ0 262 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 GAREM2Q75VX8 874 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 KLHDC8AQ8IYD2 350 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 MRPL43Q8N983 215 aaKnown RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 C1GALT1C1Q96EU7 318 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 DCLRE1CQ96SD1 692 aaKnown RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 POLDIP3Q9BY77 421 aaKnown RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 POLR2J3Q9H1A7 115 aaKnown RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 NARFLQ9H6Q4 476 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 B3GAT2Q9NPZ5 323 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 EIF3KQ9UBQ5 218 aaKnown RBP14.03□□□□□ -0.16
CAPN1-224ENST00000533129 OBSL1O75147 1896 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 OR10H3O60404 316 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 FURINP09958 794 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 NR2F6P10588 404 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 DDX5P17844 614 aaKnown RBP14.02□□□□□ -0.16
CAPN1-224ENST00000533129 SLC7A9P82251 487 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 CYP4F8P98187 520 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 RETSATQ6NUM9 610 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 Q6ZNB5 142 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 TPRG1Q6ZUI0 275 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 RTL10Q7L3V2 364 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 BCDIN3DQ7Z5W3 292 aaKnown RBP14.02□□□□□ -0.16
CAPN1-224ENST00000533129 FAM20CQ8IXL6 584 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 ADAMTS19Q8TE59 1207 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 CIDECQ96AQ7 238 aaPredicted RBP14.02□□□□□ -0.16
CAPN1-224ENST00000533129 CREB3L1Q96BA8 519 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 PPCDCQ96CD2 204 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 ASIC4Q96FT7 647 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 MRPL39Q9NYK5 338 aaKnown RBP14.02□□□□□ -0.16
CAPN1-224ENST00000533129 MAT2BQ9NZL9 334 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 COMMD3Q9UBI1 195 aa14.02□□□□□ -0.16
CAPN1-224ENST00000533129 LSM7Q9UK45 103 aaKnown RBP14.02□□□□□ -0.16
CAPN1-224ENST00000533129 TMEM129A0AVI4 362 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 LINC00862A6NCI5 91 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 GREM1O60565 184 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 NAT1P18440 290 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 POLR2CP19387 275 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-224ENST00000533129 DSTNP60981 165 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 ALDH6A1Q02252 535 aaKnown RBP14.02□□□□□ -0.17
CAPN1-224ENST00000533129 CRTC2Q53ET0 693 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-224ENST00000533129 PLPP4Q5VZY2 271 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 REEP3Q6NUK4 255 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 LSMEM1Q8N8F7 131 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 SYT14Q8NB59 555 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 OR5AK3PQ8NH89 298 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 POF1BQ8WVV4 589 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 TEFMQ96QE5 360 aaKnown RBP14.02□□□□□ -0.17
CAPN1-224ENST00000533129 FAM117AQ9C073 453 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 BRD9Q9H8M2 597 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 YARS2Q9Y2Z4 477 aaKnown RBP14.02□□□□□ -0.17
CAPN1-224ENST00000533129 AUP1Q9Y679 476 aa14.02□□□□□ -0.17
CAPN1-224ENST00000533129 SMLR1H3BR10 107 aa14.01□□□□□ -0.17
CAPN1-224ENST00000533129 ATP1B2P14415 290 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-224ENST00000533129 SERPINA4P29622 427 aa14.01□□□□□ -0.17
CAPN1-224ENST00000533129 HLA-FP30511 346 aa14.01□□□□□ -0.17
CAPN1-224ENST00000533129 GABRA5P31644 462 aa14.01□□□□□ -0.17
CAPN1-224ENST00000533129 EVI2BP34910 448 aa14.01□□□□□ -0.17
CAPN1-224ENST00000533129 EVX1P49640 407 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms