RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 NT5DC2Q9H857 520 aa11.39□□□□□ -0.59
CAPN1-223ENST00000533079 PROK2Q9HC23 129 aa11.39□□□□□ -0.59
CAPN1-223ENST00000533079 SAYSD1Q9NPB0 183 aa11.39□□□□□ -0.59
CAPN1-223ENST00000533079 GALNT8Q9NY28 637 aa11.39□□□□□ -0.59
CAPN1-223ENST00000533079 CNOT11Q9UKZ1 510 aaKnown RBP11.39□□□□□ -0.59
CAPN1-223ENST00000533079 CAMK2AQ9UQM7 478 aa11.39□□□□□ -0.59
CAPN1-223ENST00000533079 SLC22A14Q9Y267 594 aa11.39□□□□□ -0.59
CAPN1-223ENST00000533079 TESMINQ9Y4I5 508 aa11.39□□□□□ -0.59
CAPN1-223ENST00000533079 CSPG4Q6UVK1 2322 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 STAB1Q9NY15 2570 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 A0A0G2JN53 185 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 ANKDD1BA6NHY2 528 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 POLR3GO15318 223 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-223ENST00000533079 SHBGP04278 402 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 C1GALT1C1LP0DN25 315 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 PHBP35232 272 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 STT3AP46977 705 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 KCNC1P48547 511 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 CDK9P50750 372 aaKnown RBP11.38□□□□□ -0.59
CAPN1-223ENST00000533079 PLA2G16P53816 162 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 EEF1A1P68104 462 aaKnown RBP11.38□□□□□ -0.59
CAPN1-223ENST00000533079 PLIN5Q00G26 463 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 PDIA2Q13087 525 aaKnown RBP11.38□□□□□ -0.59
CAPN1-223ENST00000533079 SLBPQ14493 270 aaKnown RBP eCLIP11.38□□□□□ -0.59
CAPN1-223ENST00000533079 NTRK2Q16620 822 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 KRT71Q3SY84 523 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 EEF1A1P5Q5VTE0 462 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 ABHD17CQ6PCB6 329 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 CNTN4Q8IWV2 1026 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 VWA5B2Q8N398 1253 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 SRFBP1Q8NEF9 429 aaKnown RBP11.38□□□□□ -0.59
CAPN1-223ENST00000533079 OR10G3Q8NGC4 313 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 OR2W6PQ8NHA6 318 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 ZPLD1Q8TCW7 415 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 PYROXD1Q8WU10 500 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 FBXL20Q96IG2 436 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 JSRP1Q96MG2 331 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-223ENST00000533079 KCNC2Q96PR1 638 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 TM9SF2Q99805 663 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 CAPS2Q9BXY5 557 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 GSX2Q9BZM3 304 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 UBQLN3Q9H347 655 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 PIGMQ9H3S5 423 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 EHD1Q9H4M9 534 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 IARS2Q9NSE4 1012 aaKnown RBP11.38□□□□□ -0.59
CAPN1-223ENST00000533079 LGALS13Q9UHV8 139 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 TEX264Q9Y6I9 313 aa11.38□□□□□ -0.59
CAPN1-223ENST00000533079 HIVEP2P31629 2446 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 NCKAP5O14513 1909 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 TRIM64A6NGJ6 449 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 TRIM64BA6NI03 449 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 OR6C76A6NM76 312 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 CAPN14A8MX76 684 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 TP53I11O14683 189 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 LDB3O75112 727 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 SNX4O95219 450 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 ETHE1O95571 254 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 ACSL3O95573 720 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 C8BP07358 591 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 GCKP35557 465 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 MSH2P43246 934 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 TMED10P49755 219 aaKnown RBP11.37□□□□□ -0.59
CAPN1-223ENST00000533079 DIO3P55073 304 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 IGLV3-21P80748 117 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-223ENST00000533079 CRYMQ14894 314 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 RPS6KA2Q15349 733 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 ACKR1Q16570 336 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 RBM20Q5T481 1227 aaKnown RBP11.37□□□□□ -0.59
CAPN1-223ENST00000533079 SLCO4C1Q6ZQN7 724 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 SLC29A4Q7RTT9 530 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 ZBED8Q8IZ13 594 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 SREK1Q8WXA9 508 aaKnown RBP11.37□□□□□ -0.59
CAPN1-223ENST00000533079 DGAT2Q96PD7 388 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 ZNF226Q9NYT6 803 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 GPRC5BQ9NZH0 403 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 C15orf41Q9Y2V0 281 aa11.37□□□□□ -0.59
CAPN1-223ENST00000533079 RGS16O15492 202 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-223ENST00000533079 TMCC2O75069 709 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 CDH16O75309 829 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 TRAPPC6AO75865 159 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 SCELO95171 688 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 ACTL6AO96019 429 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 PGAM1P18669 254 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 RPP38P78345 283 aaKnown RBP11.36□□□□□ -0.59
CAPN1-223ENST00000533079 GAB1Q13480 694 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 SPRED3Q2MJR0 410 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 MSS51Q4VC12 460 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 FAM45BPQ6NSW5 357 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 PODNL1Q6PEZ8 512 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 LUZP2Q86TE4 346 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 TAGAPQ8N103 731 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 FAM45AQ8TCE6 357 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 DIO2Q92813 273 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 PERPQ96FX8 193 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 WDYHV1Q96HA8 205 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 SENP5Q96HI0 755 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-223ENST00000533079 PELOQ9BRX2 385 aaKnown RBP11.36□□□□□ -0.59
CAPN1-223ENST00000533079 NAT9Q9BTE0 207 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 UGT2B28Q9BY64 529 aa11.36□□□□□ -0.59
CAPN1-223ENST00000533079 PACSIN3Q9UKS6 424 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms