RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 NAGLUP54802 743 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 GNGT1P63211 74 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 MPEG1Q2M385 716 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 NDUFAF5Q5TEU4 345 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 OPN5Q6U736 354 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 SIAH3Q8IW03 269 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 GBP7Q8N8V2 638 aaPredicted RBP15.44■□□□□ 0.06
PKP3-209ENST00000533069 METTL6Q8TCB7 284 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 RIT1Q92963 219 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 PPWD1Q96BP3 646 aaKnown RBP15.44■□□□□ 0.06
PKP3-209ENST00000533069 CHMP6Q96FZ7 201 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 C7orf26Q96N11 449 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 MECRQ9BV79 373 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 NSRP1Q9H0G5 558 aaKnown RBP15.44■□□□□ 0.06
PKP3-209ENST00000533069 TEX10Q9NXF1 929 aaPredicted RBP15.44■□□□□ 0.06
PKP3-209ENST00000533069 DOPEY1Q5JWR5 2465 aa15.44■□□□□ 0.06
PKP3-209ENST00000533069 NPIPA5E9PKD4 350 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 PEX1O43933 1283 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 ULK1O75385 1050 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 OR6B1O95007 311 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 ESRRBO95718 433 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 BGNP21810 368 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 PIK3R1P27986 724 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 HMOX2P30519 316 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 SOX3P41225 446 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 MEOX1P50221 254 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 CASP6P55212 293 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 ABCE1P61221 599 aaKnown RBP15.43■□□□□ 0.06
PKP3-209ENST00000533069 TBL3Q12788 808 aaKnown RBP15.43■□□□□ 0.06
PKP3-209ENST00000533069 C1QL3Q5VWW1 255 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 BNC2Q6ZN30 1099 aaPredicted RBP15.43■□□□□ 0.06
PKP3-209ENST00000533069 C16orf47Q6ZP98 133 aaPredicted RBP15.43■□□□□ 0.06
PKP3-209ENST00000533069 FRMD7Q6ZUT3 714 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 MDGA2Q7Z553 956 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 SULF2Q8IWU5 870 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 C9orf40Q8IXQ3 194 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 CPSF7Q8N684 471 aaKnown RBP15.43■□□□□ 0.06
PKP3-209ENST00000533069 PSD4Q8NDX1 1056 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 OR4K14Q8NGD5 310 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 MAGED4Q96JG8 741 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 SGCZQ96LD1 299 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 SIKE1Q9BRV8 207 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 CNPPD1Q9BV87 410 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 GATA5Q9BWX5 397 aaPredicted RBP15.43■□□□□ 0.06
PKP3-209ENST00000533069 LIN28AQ9H9Z2 209 aaKnown RBP15.43■□□□□ 0.06
PKP3-209ENST00000533069 VPS29Q9UBQ0 182 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 NPIPA1Q9UND3 350 aa15.43■□□□□ 0.06
PKP3-209ENST00000533069 POLEQ07864 2286 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 C1orf226A1L170 272 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 OR6C76A6NM76 312 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SLCO1B7G3V0H7 640 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 PGRMC2O15173 223 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 ASNA1O43681 348 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SLC19A2O60779 497 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SNNO75324 88 aaPredicted RBP15.42■□□□□ 0.06
PKP3-209ENST00000533069 HSPA4LO95757 839 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SLC1A6P48664 564 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 TRA2BP62995 288 aaKnown RBP15.42■□□□□ 0.06
PKP3-209ENST00000533069 ERVK-8P63133 956 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SRSF11Q05519 484 aaKnown RBP15.42■□□□□ 0.06
PKP3-209ENST00000533069 BST1Q10588 318 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 MTFR2Q6P444 385 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 IL20RBQ6UXL0 311 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 RNF111Q6ZNA4 994 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 DGAT2L6Q6ZPD8 337 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 RTL4Q6ZR62 310 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SLC29A4Q7RTT9 530 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 MAMDC2Q7Z304 686 aaPredicted RBP15.42■□□□□ 0.06
PKP3-209ENST00000533069 FJX1Q86VR8 437 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 GALNT12Q8IXK2 581 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 GHDCQ8N2G8 530 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SLC15A4Q8N697 577 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 CCNYL1Q8N7R7 359 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 ZFP62Q8NB50 900 aaPredicted RBP15.42■□□□□ 0.06
PKP3-209ENST00000533069 GOLM1Q8NBJ4 401 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SLC22A8Q8TCC7 542 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 HBEGFQ99075 208 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 GSTO2Q9H4Y5 243 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SUCOQ9UBS9 1254 aaKnown RBP15.42■□□□□ 0.06
PKP3-209ENST00000533069 ERVK-19Q9WJR5 959 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 PCDHA9Q9Y5H5 950 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 SPTAN1Q13813 2472 aaKnown RBP15.42■□□□□ 0.06
PKP3-209ENST00000533069 DOPEY2Q9Y3R5 2298 aa15.42■□□□□ 0.06
PKP3-209ENST00000533069 UTP20O75691 2785 aaKnown RBP15.41■□□□□ 0.06
PKP3-209ENST00000533069 TRGV8A0A0C4DH27 118 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 GMNCA6NCL1 334 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 HRKO00198 91 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 TFECO14948 347 aaPredicted RBP15.41■□□□□ 0.06
PKP3-209ENST00000533069 TGDSO95455 350 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 CA7P43166 264 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 GYS2P54840 703 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 SLC37A1P57057 533 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 ZNF267Q14586 743 aaPredicted RBP15.41■□□□□ 0.06
PKP3-209ENST00000533069 PIGGQ5H8A4 983 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 TCHHL1Q5QJ38 904 aaPredicted RBP15.41■□□□□ 0.06
PKP3-209ENST00000533069 C6orf163Q5TEZ5 329 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 SLC48A1Q6P1K1 146 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 DND1Q8IYX4 353 aaKnown RBP15.41■□□□□ 0.06
PKP3-209ENST00000533069 C1orf52Q8N6N3 182 aaKnown RBP15.41■□□□□ 0.06
PKP3-209ENST00000533069 C16orf52Q8NHV5 167 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms