RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 PPIAL4AQ9Y536 164 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 NPTNQ9Y639 398 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 ATP10AO60312 1499 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PTPRCP08575 1304 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 FRMPD4Q14CM0 1322 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 NPEPPSL1A6NEC2 478 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 I6L893 689 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 TRIAP1O43715 76 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 OR10H2O60403 315 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PSPNO60542 156 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 ZFPL1O95159 310 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 CLDN7O95471 211 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 APOEP02649 317 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 C8BP07358 591 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 ADH4P08319 380 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 RFPL3SP0C7P2 107 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 TNNI1P19237 187 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PSMA2P25787 234 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 CDKN2CP42773 168 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 SMCPP49901 116 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 NXPH1P58417 271 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PSG3Q16557 428 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PLEKHA7Q6IQ23 1121 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 CWC27Q6UX04 472 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 TPRG1Q6ZUI0 275 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 LINGO2Q7L985 606 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PTF1AQ7RTS3 328 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 TMPRSS11BQ86T26 416 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 CHSY1Q86X52 802 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 DCUN1D3Q8IWE4 304 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 SLC44A5Q8NCS7 719 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 FAR1Q8WVX9 515 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PROX1Q92786 737 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 DUS3LQ96G46 650 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 IGSF21Q96ID5 467 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 ZNF570Q96NI8 536 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PRR25Q96S07 402 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 DHX33Q9H6R0 707 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 CHST11Q9NPF2 352 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 DYRK4Q9NR20 520 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 TREX1Q9NSU2 369 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PARPBPQ9NWS1 579 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 ZNF346Q9UL40 294 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 IQGAP1P46940 1657 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 PPRC1Q5VV67 1664 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 AK9Q5TCS8 1911 aa4.88□□□□□ -1.63
ECHDC1-222ENST00000531967 MROH7-TTC4A0A0A0MT08 1334 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 A8MUA0 341 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 CLDN5O00501 218 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 DLGAP1O14490 977 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 TRAFD1O14545 582 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 PRYO14603 147 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 BIRC5O15392 142 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 TMPRSS11DO60235 418 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 SCGNO76038 276 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 SERPIND1P05546 499 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 SERPINA6P08185 405 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 CD63P08962 238 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 ACADSP16219 412 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 MBTD1Q05BQ5 628 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 CRYZQ08257 329 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 IFFO1Q0D2I5 559 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 SLAMF1Q13291 335 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 CD300EQ496F6 205 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 PRAMEF19Q5SWL8 479 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 EFCAB12Q6NXP0 572 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 TTC33Q6PID6 262 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 ASCL4Q6XD76 172 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 CROCCP3Q8IVE0 287 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 ZNF276Q8N554 614 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 PARP16Q8N5Y8 322 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 ATOH1Q92858 354 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 GLYATL1Q969I3 302 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 RAB39BQ96DA2 213 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 TMA16Q96EY4 203 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 VSTM2LQ96N03 204 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 CLIC6Q96NY7 704 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 TGM7Q96PF1 710 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 TSSK3Q96PN8 268 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 CTRCQ99895 268 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 NAT9Q9BTE0 207 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 RBM24Q9BX46 236 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 SPRTNQ9H040 489 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 C12orf10Q9HB07 376 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 SLC40A1Q9NP59 571 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 CD320Q9NPF0 282 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 IL23AQ9NPF7 189 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 ASIC3Q9UHC3 531 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 PHF11Q9UIL8 331 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 UTS2RQ9UKP6 389 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 PLA2G2DQ9UNK4 145 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 MAGI2Q86UL8 1455 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 CNTNAP5Q8WYK1 1306 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 A0A1W2PQ72 361 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 MGAT4DA6NG13 374 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 TMEM200CA6NKL6 621 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 NPIPB6E9PJ23 425 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 IDH3BO43837 385 aa4.87□□□□□ -1.63
ECHDC1-222ENST00000531967 IGHV2-70P01814 119 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms