RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SHBGP04278 402 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 SNRPAP09012 282 aaKnown RBP13.1□□□□□ -0.31
CAPN1-212ENST00000527887 FBXO45P0C2W1 286 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 ELAVL4P26378 380 aaKnown RBP13.1□□□□□ -0.31
CAPN1-212ENST00000527887 ARL1P40616 181 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-212ENST00000527887 NEK2P51955 445 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 SLC37A1P57057 533 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 HERVK_113P63132 956 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 ERVK-8P63133 956 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 ZNF267Q14586 743 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-212ENST00000527887 KRT71Q3SY84 523 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 GXYLT1Q4G148 440 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 TBCELQ5QJ74 424 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 TTC19Q6DKK2 380 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-212ENST00000527887 C3P1Q6ZMU1 363 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 TRILQ7L0X0 811 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 MILR1Q7Z6M3 343 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 TAGAPQ8N103 731 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 TMEM251Q8N6I4 163 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 OR52B6Q8NGF0 335 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 LILRB4Q8NHJ6 448 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 C14orf79Q96F83 325 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 TREX2Q9BQ50 279 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-212ENST00000527887 CNPPD1Q9BV87 410 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 C1QTNF3Q9BXJ4 246 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 ERVK-6Q9BXR3 956 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 TRIM8Q9BZR9 551 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 WWTR1Q9GZV5 400 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 XPR1Q9UBH6 696 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 PCTPQ9UKL6 214 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 BOKQ9UMX3 212 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-212ENST00000527887 ERVK-19Q9WJR5 959 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 PCDHGB3Q9Y5G1 929 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 ANKRD33BA6NCL7 494 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 FOXO6A8MYZ6 492 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 NPIPA2E9PIF3 369 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 NPIPA3F8WFD2 350 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 H3BQF6 201 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 ZNHIT1O43257 154 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 NADKO95544 446 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-212ENST00000527887 AIFM1O95831 613 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 OTCP00480 354 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 CCL3P10147 92 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 CAPN3P20807 821 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 PIK3R1P27986 724 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 KIR3DL1P43629 444 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 EBPQ15125 230 aaKnown RBP13.09□□□□□ -0.31
CAPN1-212ENST00000527887 CDSNQ15517 529 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 EMC4Q5J8M3 183 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 LYPD8Q6UX82 237 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 DGAT2L6Q6ZPD8 337 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 METTL4Q8N3J2 472 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 FBXW8Q8N3Y1 598 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 ARFGAP2Q8N6H7 521 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 OR4K14Q8NGD5 310 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 SARAFQ96BY9 339 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 MTBPQ96DY7 904 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 PCNX1Q96RV3 2341 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 SMC6Q96SB8 1091 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 SECISBP2Q96T21 854 aaKnown RBP13.09□□□□□ -0.31
CAPN1-212ENST00000527887 ELOVL6Q9H5J4 265 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 CXorf21Q9HAI6 301 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 BRF2Q9HAW0 419 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 SLC24A3Q9HC58 644 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 ZFP64Q9NPA5 681 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 ACKR4Q9NPB9 350 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 ZNF358Q9NW07 568 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 SENP1Q9P0U3 644 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 PSME2Q9UL46 239 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 SNX6Q9UNH7 406 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 HRH3Q9Y5N1 445 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 ACTL7BQ9Y614 415 aa13.09□□□□□ -0.31
CAPN1-212ENST00000527887 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.09□□□□□ -0.31
CAPN1-212ENST00000527887 NCOA6Q14686 2063 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-212ENST00000527887 A0A0G2JMM0 328 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 EXOC1LA0A1B0GW35 172 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 A0A1W2PPB8 328 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 A0A1W2PRS3 328 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 KIR3DP1A8MWS1 328 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 POC1B-GALNT4F8VUJ3 575 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 C19orf84I3L1E1 186 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 HRKO00198 91 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 TP53I11O14683 189 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 PGRMC2O15173 223 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 RGS16O15492 202 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-212ENST00000527887 WDR1O75083 606 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 KLK1P06870 262 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.32
CAPN1-212ENST00000527887 GABRA1P14867 456 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 ACVR2AP27037 513 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 MAGEA5P43359 124 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 MAN2A2P49641 1150 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 TMED10P49755 219 aaKnown RBP13.08□□□□□ -0.32
CAPN1-212ENST00000527887 KCNJ2P63252 427 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 RPP38P78345 283 aaKnown RBP13.08□□□□□ -0.32
CAPN1-212ENST00000527887 FUT7Q11130 342 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 TRAF3Q13114 568 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 NTRK2Q16620 822 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 CCNYL2Q5T2Q4 361 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 WLSQ5T9L3 541 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms