RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 NSUN5Q96P11 429 aaKnown RBP12.36□□□□□ -0.43
CAPN1-207ENST00000527189 CNPPD1Q9BV87 410 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 WWTR1Q9GZV5 400 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 CXorf21Q9HAI6 301 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 SEMA4BQ9NPR2 832 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-207ENST00000527189 QPCTLQ9NXS2 382 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 FETUBQ9UGM5 382 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 SNX6Q9UNH7 406 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 HRH3Q9Y5N1 445 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 CCDC168Q8NDH2 2452 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 C2orf92A0A1B0GVN3 265 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 C1orf226A1L170 272 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 ANKRD33BA6NCL7 494 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 A8MT66 165 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 FAM166BA8MTA8 275 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 AQP7O14520 342 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 PGRMC2O15173 223 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 HCN1O60741 890 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 GBAP04062 536 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 HOXD4P09016 255 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-207ENST00000527189 SBK3P0C264 359 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 PORP16435 677 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-207ENST00000527189 HSD17B3P37058 310 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 MAGEA5P43359 124 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 XKP51811 444 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 FUT7Q11130 342 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 CDSNQ15517 529 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 NTRK2Q16620 822 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 EMC4Q5J8M3 183 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 TBCELQ5QJ74 424 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 TRILQ7L0X0 811 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 FBXW8Q8N3Y1 598 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 ACBD4Q8NC06 268 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 C17orf47Q8NEP4 570 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 OR7G1Q8NGA0 311 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 LILRB4Q8NHJ6 448 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 SECISBP2Q96T21 854 aaKnown RBP12.35□□□□□ -0.43
CAPN1-207ENST00000527189 MRPL1Q9BYD6 325 aaKnown RBP12.35□□□□□ -0.43
CAPN1-207ENST00000527189 ENKD1Q9H0I2 346 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 ZFP64Q9NPA5 681 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 TEX10Q9NXF1 929 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-207ENST00000527189 TUBA8Q9NY65 449 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-207ENST00000527189 TRPS1Q9UHF7 1281 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 PSME2Q9UL46 239 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 NFU1Q9UMS0 254 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 BOKQ9UMX3 212 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-207ENST00000527189 PCDHGB3Q9Y5G1 929 aa12.35□□□□□ -0.43
CAPN1-207ENST00000527189 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.35□□□□□ -0.43
CAPN1-207ENST00000527189 PKDREJQ9NTG1 2253 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 A0A0G2JMM0 328 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 A0A1W2PPB8 328 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 A0A1W2PRS3 328 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 GOLGA6L10A6NI86 522 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 FIGNL2A6NMB9 653 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 KIR3DP1A8MWS1 328 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 NPIPA2E9PIF3 369 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 NPIPA3F8WFD2 350 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 G3V3Y1 287 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 TP53I11O14683 189 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 CTIFO43310 598 aaKnown RBP12.34□□□□□ -0.43
CAPN1-207ENST00000527189 RIPK2O43353 540 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 CLPSP04118 112 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 HSD3B1P14060 373 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 HSD3B2P26439 372 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 SSTR2P30874 369 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 CHRNB4P30926 498 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 KIR3DL1P43629 444 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 DNASE1L1P49184 302 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 MAPK12P53778 367 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 CDH13P55290 713 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 TRA2BP62995 288 aaKnown RBP12.34□□□□□ -0.43
CAPN1-207ENST00000527189 CLCQ05315 142 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 C6orf163Q5TEZ5 329 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 HLA-DQA1Q5Y7H0 255 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 LETMD1Q6P1Q0 360 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 NCCRP1Q6ZVX7 275 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-207ENST00000527189 SLC22A9Q8IVM8 553 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 GALNT12Q8IXK2 581 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 ZNF441Q8N8Z8 693 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 UHMK1Q8TAS1 419 aaKnown RBP12.34□□□□□ -0.43
CAPN1-207ENST00000527189 ACMSDQ8TDX5 336 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 SELENOMQ8WWX9 145 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 SREK1Q8WXA9 508 aaKnown RBP12.34□□□□□ -0.43
CAPN1-207ENST00000527189 SARAFQ96BY9 339 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 GAL3ST4Q96RP7 486 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 SMC6Q96SB8 1091 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 ACKR4Q9NPB9 350 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 CES1P1Q9UKY3 287 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 SLC12A4Q9UP95 1085 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 CFL2Q9Y281 166 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 STK38LQ9Y2H1 464 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 PCDHA9Q9Y5H5 950 aa12.34□□□□□ -0.43
CAPN1-207ENST00000527189 CHCHD2Q9Y6H1 151 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-207ENST00000527189 DNAJC13O75165 2243 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 ZNF407Q9C0G0 2248 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 ATP6AP2A0A1C7CYW4 349 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 PPP6CO00743 305 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 WDR1O75083 606 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 ATP6AP2O75787 350 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms