RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CLN6Q9NWW5 311 aa16.61■□□□□ 0.25
USH1C-205ENST00000527020 TMEM247A6NEH6 219 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 M0R3H8 397 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 TLR4O00206 839 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 SCAMP1O15126 338 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 OR10H3O60404 316 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 ENTPD6O75354 484 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 EN2P19622 333 aaPredicted RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 GPC1P35052 558 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 SOX9P48436 509 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 SNRPGP62308 76 aaKnown RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 ZNF404Q494X3 552 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 SLX4IPQ5VYV7 408 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 C12orf73Q69YU5 71 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 PLAG1Q6DJT9 500 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 MRM1Q6IN84 353 aaKnown RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 USP43Q70EL4 1123 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 ZNF367Q7RTV3 350 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 C9orf43Q8TAL5 461 aaPredicted RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 SUN3Q8TAQ9 357 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 CENPOQ9BU64 300 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 SPHK1Q9NYA1 384 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 TRPC4Q9UBN4 977 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 ATG4BQ9Y4P1 393 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 A0A1W2PQU0 124 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 A0A1W2PS29 197 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 ERI3O43414 337 aaKnown RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 SERPINB7O75635 380 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 CHRM4P08173 479 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 ALPPL2P10696 532 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 SEC13P55735 322 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 RPS21P63220 83 aaKnown RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 RELAQ04206 551 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 PIN1Q13526 163 aaPredicted RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 ABHD17CQ6PCB6 329 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 C19orf48Q6RUI8 117 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 HMGN2P46Q86SG4 172 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 YAF2Q8IY57 180 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 OR2L3Q8NG85 312 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 RASSF5Q8WWW0 418 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 CNRIP1Q96F85 164 aaPredicted RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 NEURL2Q9BR09 285 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 RAB11FIP5Q9BXF6 653 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 NXF2Q9GZY0 626 aaKnown RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 MKRN2Q9H000 416 aaKnown RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 SLC6A17Q9H1V8 727 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 MTIF3Q9H2K0 278 aaKnown RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 MMP27Q9H306 513 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 ZSCAN32Q9NX65 697 aa16.6■□□□□ 0.25
USH1C-205ENST00000527020 SCHIP1Q9P0W5 487 aaPredicted RBP16.6■□□□□ 0.25
USH1C-205ENST00000527020 LOC100506127A0A0U1RQW1 187 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 NR2F1P10589 423 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 PIPP12273 146 aaPredicted RBP16.59■□□□□ 0.25
USH1C-205ENST00000527020 HIST1H1TP22492 207 aaPredicted RBP16.59■□□□□ 0.25
USH1C-205ENST00000527020 TGM1P22735 817 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 ATP5A1P25705 553 aaKnown RBP16.59■□□□□ 0.25
USH1C-205ENST00000527020 SLC9A5Q14940 896 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 UAP1L1Q3KQV9 507 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 TMEM201Q5SNT2 666 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 ACOT4Q8N9L9 421 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 MYADMQ96S97 322 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 YIPF4Q9BSR8 244 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 RPP25Q9BUL9 199 aaKnown RBP16.59■□□□□ 0.25
USH1C-205ENST00000527020 FAIM2Q9BWQ8 316 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 CDADC1Q9BWV3 514 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 SLC17A9Q9BYT1 436 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 MAN2C1Q9NTJ4 1040 aa16.59■□□□□ 0.25
USH1C-205ENST00000527020 YBX2Q9Y2T7 364 aaKnown RBP16.59■□□□□ 0.25
USH1C-205ENST00000527020 K7EQS6 105 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 CNOT3O75175 753 aaKnown RBP16.58■□□□□ 0.25
USH1C-205ENST00000527020 HSMCR30P0CW71 290 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 DBTP11182 482 aaKnown RBP16.58■□□□□ 0.25
USH1C-205ENST00000527020 GDI1P31150 447 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 TIE1P35590 1138 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 KIR2DL1P43626 348 aaPredicted RBP16.58■□□□□ 0.25
USH1C-205ENST00000527020 UGT2B15P54855 530 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 SGCGQ13326 291 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 RPE65Q16518 533 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 C9orf50Q5SZB4 431 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 ZNF776Q68DI1 518 aaPredicted RBP16.58■□□□□ 0.25
USH1C-205ENST00000527020 TMEM64Q6YI46 380 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 ATCAYQ86WG3 371 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 RNF217Q8TC41 542 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 FAM131CQ96AQ9 280 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 SLC6A18Q96N87 628 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 BBS4Q96RK4 519 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 ROGDIQ9GZN7 287 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 IGFLR1Q9H665 355 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 RMI1Q9H9A7 625 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 BCL2L10Q9HD36 194 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 FBXL12Q9NXK8 326 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 CES1P1Q9UKY3 287 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 KLHL20Q9Y2M5 609 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 GPSM3Q9Y4H4 160 aa16.58■□□□□ 0.25
USH1C-205ENST00000527020 SCN3AQ9NY46 2000 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 KRBA1A5PL33 1030 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 PDZK1P1A8MUH7 402 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 PLRG1O43660 514 aaKnown RBP16.58■□□□□ 0.24
USH1C-205ENST00000527020 ERAL1O75616 437 aaKnown RBP16.58■□□□□ 0.24
USH1C-205ENST00000527020 SLITRK5O94991 958 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms