RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 TRIB1Q96RU8 372 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 TIMP4Q99727 224 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 PIP5K1AQ99755 562 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 RBM24Q9BX46 236 aaKnown RBP11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 TRIM54Q9BYV2 358 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 CAB39LQ9H9S4 337 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 GALNT8Q9NY28 637 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 DAPP1Q9UN19 280 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 CAMK2AQ9UQM7 478 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 SLC22A14Q9Y267 594 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 IKBKGQ9Y6K9 419 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 CUBNO60494 3623 aa11.45□□□□□ -0.58
CCDC90B-205ENST00000525916 LRIT2A6NDA9 550 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 SYNDIG1LA6NDD5 238 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 MBD3L4A6NDZ8 208 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 MBD3L3A6NE82 208 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 MBD3L5A6NJ08 208 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 CTNSO60931 367 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 ALDOAP04075 364 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 SLC35E2BP0CK96 405 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 OPRM1P35372 400 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 ID2Q02363 134 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 MROH9Q5TGP6 573 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 PRSS57Q6UWY2 283 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 TIFABQ6ZNK6 161 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 LUZP2Q86TE4 346 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 OR10G3Q8NGC4 313 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 MBD3L2Q8NHZ7 208 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 SLC22A8Q8TCC7 542 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 ANKRD49Q8WVL7 239 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 DERL2Q9GZP9 239 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 PRDM14Q9GZV8 571 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 COPS7AQ9UBW8 275 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 IKZF3Q9UKT9 509 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 CHCHD2Q9Y6H1 151 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 MXRA5Q9NR99 2828 aa11.44□□□□□ -0.58
CCDC90B-205ENST00000525916 A0A088AWK7 358 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 CD8B2A6NJW9 211 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 PHGDHO43175 533 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 TBX6O95947 436 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 SNRPAP09012 282 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 ZNF10P21506 573 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 SERPINB8P50452 374 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 DCST1Q5T197 706 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 LGSNQ5TDP6 509 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 TRIM40Q6P9F5 258 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 CMC1Q7Z7K0 106 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 PHC2Q8IXK0 858 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 PM20D2Q8IYS1 436 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 C9orf106Q8NAJ2 232 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 OR2L5Q8NG80 312 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 NUBPLQ8TB37 319 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 MZB1Q8WU39 189 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 PIGTQ969N2 578 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 MTBPQ96DY7 904 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 ZNF597Q96LX8 424 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 SERINC2Q96SA4 455 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 DOHHQ9BU89 302 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 COPS7BQ9H9Q2 264 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 SNX15Q9NRS6 342 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 CNIH4Q9P003 139 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 C6orf203Q9P0P8 240 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 PSMC3IPQ9P2W1 217 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 CNOT11Q9UKZ1 510 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 EIF3LQ9Y262 564 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 SLC6A5Q9Y345 797 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 KCNE2Q9Y6J6 123 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 USF3Q68DE3 2245 aa11.43□□□□□ -0.58
CCDC90B-205ENST00000525916 A0A087X1B8 175 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 RNF212BA8MTL3 300 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 TRIM49D1C9J1S8 452 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 HRKO00198 91 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 SIAH2O43255 324 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 ERN1O75460 977 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 CRLF1O75462 422 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 TRAPPC6AO75865 159 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 IL18BPO95998 194 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 C2P06681 752 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 ENO2P09104 434 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 CCDC166P0CW27 439 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 TMIGD3P0DMS9 266 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 CD1DP15813 335 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 BMP7P18075 431 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 CPA2P48052 419 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 MTTPP55157 894 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 ATP6V0D1P61421 351 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 TBL3Q12788 808 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 FOXF2Q12947 444 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 SERTAD2Q14140 314 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 SLBPQ14493 270 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 PPP1R3AQ16821 1122 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 VASNQ6EMK4 673 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 ADNP2Q6IQ32 1131 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 SBSNQ6UWP8 590 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 TMIGD1Q6UXZ0 262 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 TTLQ8NG68 377 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 CCL19Q99731 98 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 TMEM109Q9BVC6 243 aa11.42□□□□□ -0.58
CCDC90B-205ENST00000525916 ROPN1BQ9BZX4 212 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms