RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SENP1Q9P0U3 644 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 PITPNC1Q9UKF7 332 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ZNF346Q9UL40 294 aaKnown RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 ZNF490Q9ULM2 529 aaPredicted RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 SH2B3Q9UQQ2 575 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 NFE2L3Q9Y4A8 694 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 PPIAL4AQ9Y536 164 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 INSL6Q9Y581 213 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SIRT4Q9Y6E7 314 aaPredicted RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 DNMT1P26358 1616 aaKnown RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 TTC21AQ8NDW8 1320 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 CDC42BPAQ5VT25 1732 aa4.15□□□□□ -1.74
CD44-213ENST00000525209 NPATQ14207 1427 aa4.15□□□□□ -1.74
CD44-213ENST00000525209 RNF17Q9BXT8 1623 aaKnown RBP4.15□□□□□ -1.74
CD44-213ENST00000525209 A0A096LPK6 155 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 A0A1W2PQ72 361 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 RAB19A4D1S5 217 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 DDTLA6NHG4 134 aaPredicted RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 FBLL1A6NHQ2 334 aaKnown RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 LRRC3CA6NJW4 275 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 A8MU76 341 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 HHLA1C9JL84 531 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 C1QTNF3-AMACRE9PGA6 284 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 F8VVB4 439 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 F8VWA3 439 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 NPIPA3F8WFD2 350 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 I6L893 689 aaPredicted RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 NDUFAB1O14561 156 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 GPR171O14626 319 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 SLC16A5O15375 505 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 STX7O15400 261 aaKnown RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 COCHO43405 550 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 NDUFA7O95182 113 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 CLDN7O95471 211 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 FCER2P06734 321 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 IL6RP08887 468 aaPredicted RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 ALOX5P09917 674 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 DARSP14868 501 aaKnown RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 HOXB8P17481 243 aaPredicted RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 LAP3P28838 519 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 SSTR1P30872 391 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 CBX5P45973 191 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 HSPA13P48723 471 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 METAP2P50579 478 aaKnown RBP eCLIP4.15□□□□□ -1.75
CD44-213ENST00000525209 NR0B1P51843 470 aaKnown RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 RWDD2BP57060 319 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 PRPS1P60891 318 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 EEF1A1P68104 462 aaKnown RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 ZXDBP98169 803 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 MAT1AQ00266 395 aaKnown RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 PSG6Q00889 435 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 CFHR3Q02985 330 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 EEF1A2Q05639 463 aaKnown RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 CRYZQ08257 329 aaKnown RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 GAGE2BQ13066 116 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 STX3Q13277 289 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 ART3Q13508 389 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 VEZF1Q14119 521 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 GCKRQ14397 625 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 ITIH4Q14624 930 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 TAF13Q15543 124 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 VAMP3Q15836 100 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 GAGE2EQ4V326 116 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 CLVS2Q5SYC1 327 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 FAM102AQ5T9C2 384 aaPredicted RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 ZNF658Q5TYW1 1059 aaPredicted RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 EEF1A1P5Q5VTE0 462 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 NADSYN1Q6IA69 706 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 GAGE2AQ6NT46 116 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 TCTN3Q6NUS6 607 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 C1orf94Q6P1W5 598 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 FAM171BQ6P995 826 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 RFWD3Q6PCD5 774 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 KCNIP4Q6PIL6 250 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 LEKR1Q6ZMV7 388 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 Q6ZUG5 572 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 NCCRP1Q6ZVX7 275 aaPredicted RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 GPR141Q7Z602 305 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 TMC8Q8IU68 726 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 NUDCD3Q8IVD9 361 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 D2HGDHQ8N465 521 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 SPATA6LQ8N4H0 392 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 ALLCQ8N6M5 410 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 BMPERQ8N8U9 685 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 LINC01356Q8N9X3 169 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 SMYD1Q8NB12 490 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 SLC38A9Q8NBW4 561 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 OR5T1Q8NG75 326 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 OR56A1Q8NGH5 318 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 OR10Q1Q8NGQ4 319 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 ENKURQ8TC29 256 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 CAPSLQ8WWF8 208 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 SEPT8Q92599 483 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 TMEM125Q96AQ2 219 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 PYCR2Q96C36 320 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 OPTNQ96CV9 577 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
CD44-213ENST00000525209 ZSWIM1Q9BR11 485 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 TUBGCP2Q9BSJ2 902 aa4.15□□□□□ -1.75
CD44-213ENST00000525209 CCM2Q9BSQ5 444 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms