RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PFN3P60673 137 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 IL1RL1Q01638 556 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 ARHGEF7Q14155 803 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 RGNQ15493 299 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 SSX1Q16384 188 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 PTCHD3Q3KNS1 767 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 ZNF385BQ569K4 471 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 TMEM201Q5SNT2 666 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 PLEKHS1Q5SXH7 462 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 MPP7Q5T2T1 576 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 LIPJQ5W064 366 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 GRHL2Q6ISB3 625 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 CCBE1Q6UXH8 406 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 UBE2R2Q712K3 238 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 VN1R5Q7Z5H4 357 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 KIAA0907Q7Z7F0 614 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 ADIPOR2Q86V24 386 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 RNF130Q86XS8 419 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 LAS2Q8IYD9 372 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 SLC7A5P1Q8MH63 180 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 SLC5A8Q8N695 610 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 Q8N9G6 341 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 HJURPQ8NCD3 748 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 GPR26Q8NDV2 337 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 OR2I1PQ8NGU4 316 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 OR6F1Q8NGZ6 308 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 WFIKKN2Q8TEU8 576 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 CYB5D2Q8WUJ1 264 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 ASB11Q8WXH4 323 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 DNASE2BQ8WZ79 361 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 ECHDC3Q96DC8 303 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 MTFMTQ96DP5 389 aaKnown RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 KCNC2Q96PR1 638 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 MCCC1Q96RQ3 725 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 DPH2Q9BQC3 489 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 CENPOQ9BU64 300 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 EBPLQ9BY08 206 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 ZDHHC5Q9C0B5 715 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 OR2B2Q9GZK3 357 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 TMEM245Q9H330 911 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 ELOVL6Q9H5J4 265 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 RNF167Q9H6Y7 350 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 TPT1P8Q9HAU6 139 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 C3orf14Q9HBI5 128 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 NEK6Q9HC98 313 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 SMURF1Q9HCE7 757 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 CCDC177Q9NQR7 707 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 RAD18Q9NS91 495 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 TMPRSS11EQ9UL52 423 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 ZNF451Q9Y4E5 1061 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 NOX1Q9Y5S8 564 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 DSPPQ9NZW4 1301 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 CXorf51AA0A1B0GTR3 108 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 PNMA8CA0A1B0GUJ8 204 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 TMEM238LA0A1B0GVL6 79 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 SH3D21A4FU49 640 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 FAM172BPA6NC97 362 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 EFCAB10A6NFE3 127 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 NPIPB15A6NHN6 443 aaPredicted RBP7.42□□□□□ -1.22
SPIDR-223ENST00000524033 ZAR1LA6NP61 321 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 PSMD11O00231 422 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 TNFRSF11BO00300 401 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 PLK4O00444 970 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 RNASET2O00584 256 aaKnown RBP7.42□□□□□ -1.22
SPIDR-223ENST00000524033 BCAT2O15382 392 aaPredicted RBP7.42□□□□□ -1.22
SPIDR-223ENST00000524033 ZW10O43264 779 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 SEC14L5O43304 696 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 SUV39H1O43463 412 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 SGTAO43765 313 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 SCO2O43819 266 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 SSX4O60224 188 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 SH3BP5O60239 455 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 ZNF821O75541 412 aaPredicted RBP7.42□□□□□ -1.22
SPIDR-223ENST00000524033 MED26O95402 600 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 IGLV3-19P01714 112 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 PROS1P07225 676 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 HLA-EP13747 358 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 CD59P13987 128 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 COX7A2P14406 83 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 POLR2EP19388 210 aaKnown RBP7.42□□□□□ -1.22
SPIDR-223ENST00000524033 IDSP22304 550 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 TCEA1P23193 301 aaKnown RBP7.42□□□□□ -1.22
SPIDR-223ENST00000524033 DDOSTP39656 456 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 XCR1P46094 333 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 ASMTP46597 345 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 ALDH9A1P49189 494 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 PCYT1AP49585 367 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 PCBP3P57721 371 aaKnown RBP7.42□□□□□ -1.22
SPIDR-223ENST00000524033 DEFA1P59665 94 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 DEFA3P59666 94 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 SELENOWP63302 87 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 OLR1P78380 273 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 RBBP4Q09028 425 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 LRRC74AQ0VAA2 488 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 GPR50Q13585 617 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 PDE7AQ13946 482 aa7.42□□□□□ -1.22
SPIDR-223ENST00000524033 TRIP6Q15654 476 aaKnown RBP7.42□□□□□ -1.22
SPIDR-223ENST00000524033 MICAQ29983 383 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms