RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CTAG2O75638 210 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 C2P06681 752 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 CD99P14209 185 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 GABRA1P14867 456 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 CRABP2P29373 138 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 SERPINB1P30740 379 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 PIK3CBP42338 1070 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 ILF2Q12905 390 aaKnown RBP14.15□□□□□ -0.14
MRPS28-209ENST00000522987 CBLBQ13191 982 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 GTF2H2Q13888 395 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 SLC25A35Q3KQZ1 300 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 TMEM198Q66K66 360 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 MRM1Q6IN84 353 aaKnown RBP14.15□□□□□ -0.14
MRPS28-209ENST00000522987 GTF2H2CQ6P1K8 395 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 ZDHHC24Q6UX98 284 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 C17orf53Q8N3J3 647 aaPredicted RBP14.15□□□□□ -0.14
MRPS28-209ENST00000522987 ZCCHC7Q8N3Z6 543 aaKnown RBP14.15□□□□□ -0.14
MRPS28-209ENST00000522987 SLC15A4Q8N697 577 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 MYRIPQ8NFW9 859 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 RILPQ96NA2 401 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 IPPKQ9H8X2 491 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 WDR41Q9HAD4 459 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 SNX15Q9NRS6 342 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 LYARQ9NX58 379 aaKnown RBP14.15□□□□□ -0.14
MRPS28-209ENST00000522987 CNIH4Q9P003 139 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 B4GALT7Q9UBV7 327 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 CAMK2AQ9UQM7 478 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 PCDHGA11Q9Y5H2 935 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 NF1P21359 2839 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 ANKHD1Q8IWZ3 2542 aaKnown RBP14.14□□□□□ -0.15
MRPS28-209ENST00000522987 ESYT3A0FGR9 886 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 C2orf72A6NCS6 295 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 GSTA2P09210 222 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 PTX3P26022 381 aaPredicted RBP14.14□□□□□ -0.15
MRPS28-209ENST00000522987 STX2P32856 288 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 MASP1P48740 699 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 PHEXP78562 749 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 NTRK2Q16620 822 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 SPRED3Q2MJR0 410 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 ACSF3Q4G176 576 aaPredicted RBP14.14□□□□□ -0.15
MRPS28-209ENST00000522987 EIPR1Q53HC9 387 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 SGO1Q5FBB7 561 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 DCST1Q5T197 706 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 LIPJQ5W064 366 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 HLA-DQA1Q5Y7H0 255 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 RPS27LQ71UM5 84 aaKnown RBP14.14□□□□□ -0.15
MRPS28-209ENST00000522987 MAATS1Q7Z4T9 603 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 MMP21Q8N119 569 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 GNRHR2Q96P88 292 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 VPS11Q9H270 941 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 CLEC4MQ9H2X3 399 aaPredicted RBP14.14□□□□□ -0.15
MRPS28-209ENST00000522987 EPB41L4BQ9H329 900 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 ADGRE2Q9UHX3 823 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 ZFHX3Q15911 3703 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 NAV3Q8IVL0 2385 aa14.14□□□□□ -0.15
MRPS28-209ENST00000522987 A0A087X1B8 175 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 HMX2A2RU54 273 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 HSPB2A8KAH6 182 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 SYCE1LA8MT33 242 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 TRIM3O75382 744 aaPredicted RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 NT5EP21589 574 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 TACR1P25103 407 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 PIK3R1P27986 724 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 ALDH18A1P54886 795 aaKnown RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 SLC7A5Q01650 507 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 CRYZQ08257 329 aaKnown RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 RPS6KA2Q15349 733 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 HSPB2Q16082 182 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 WIPI1Q5MNZ9 446 aaPredicted RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 OR52E8Q6IFG1 317 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 PLXDC2Q6UX71 529 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 CYS1Q717R9 158 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 NUDT13Q86X67 352 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 TAGAPQ8N103 731 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 PLD6Q8N2A8 252 aaKnown RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 OR52B6Q8NGF0 335 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 WDR20Q8TBZ3 569 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 ATP6V1E2Q96A05 226 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 PHF21BQ96EK2 531 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 NSUN5Q96P11 429 aaKnown RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 TRIB1Q96RU8 372 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 TIMP4Q99727 224 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 SH3GL2Q99962 352 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 PELOQ9BRX2 385 aaKnown RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 MRPL1Q9BYD6 325 aaKnown RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 NOL11Q9H8H0 719 aaKnown RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 DDX31Q9H8H2 851 aaKnown RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 CXorf21Q9HAI6 301 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 ACKR4Q9NPB9 350 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 RNF14Q9UBS8 474 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 ST6GALNAC2Q9UJ37 374 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 DTX4Q9Y2E6 619 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 UTP11Q9Y3A2 253 aaKnown RBP14.13□□□□□ -0.15
MRPS28-209ENST00000522987 NPFFR2Q9Y5X5 522 aa14.13□□□□□ -0.15
MRPS28-209ENST00000522987 PCNX3Q9H6A9 2034 aa14.12□□□□□ -0.15
MRPS28-209ENST00000522987 A0A096LPK6 155 aa14.12□□□□□ -0.15
MRPS28-209ENST00000522987 H0YIV9 168 aa14.12□□□□□ -0.15
MRPS28-209ENST00000522987 OR7A17O14581 309 aa14.12□□□□□ -0.15
MRPS28-209ENST00000522987 DVL2O14641 736 aa14.12□□□□□ -0.15
MRPS28-209ENST00000522987 TP53I11O14683 189 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms