RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ZNF821O75541 412 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 NXPH2O95156 264 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 IFNB1P01574 187 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 FOSL2P15408 326 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 TRIM23P36406 574 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 SNRPD1P62314 119 aaKnown RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 TRA2BP62995 288 aaKnown RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 PRKCEQ02156 737 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 KLHL30Q0D2K2 578 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF177Q13360 481 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZKSCAN8Q15776 578 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 CLPPQ16740 277 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 KNOP1Q1ED39 458 aaKnown RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 SGSM1Q2NKQ1 1148 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ADPRMQ3LIE5 342 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 RIPPLY2Q5TAB7 128 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ARSKQ6UWY0 536 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 RELL2Q8NC24 303 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNRF1Q8ND25 227 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 TMEM37Q8WXS4 190 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 SYAP1Q96A49 352 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 NABP1Q96AH0 204 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF274Q96GC6 653 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 MAGED4Q96JG8 741 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 DEFB118Q96PH6 123 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 COQ10BQ9H8M1 238 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ACTR8Q9H981 624 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 NMUR1Q9HB89 426 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 C3orf14Q9HBI5 128 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 SLC25A19Q9HC21 320 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF446Q9NWS9 450 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF490Q9ULM2 529 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 SLC6A5Q9Y345 797 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF175Q9Y473 711 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 KLF2Q9Y5W3 355 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZHX2Q9Y6X8 837 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 KIF7Q2M1P5 1343 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 CUX2O14529 1486 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 NDC80O14777 642 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 ANXA9O76027 345 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 AK1P00568 194 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 CALCAP01258 141 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 RALAP11233 206 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 ADRA1AP35348 466 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 ACADSBP45954 432 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 SGSHP51688 502 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 RPS4XP62701 263 aaKnown RBP3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 CDKL1Q00532 357 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 DHODHQ02127 395 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 TMEM187Q14656 261 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 GDPGP1Q6ZNW5 385 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 Q71RC1 249 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 NFAM1Q8NET5 270 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 IPMKQ8NFU5 416 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 FLVCR1-AS1Q8TAF5 88 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 PHYHIPQ92561 330 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 TAF15Q92804 592 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 NTNG2Q96CW9 530 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 PRICKLE1Q96MT3 831 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 ALKBH3Q96Q83 286 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 GPA33Q99795 319 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 ST6GALNAC5Q9BVH7 336 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 NLNQ9BYT8 704 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 NLGN3Q9NZ94 848 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 PARD3Q8TEW0 1356 aa3.85□□□□□ -1.79
HMGB1P1-201ENST00000522557 IGHV4-30-2A0A087WSY4 118 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 A0A087WZY1 265 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 A0A1B0GU03 582 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 FAM230AA0A1W2PPH8 454 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 FBLL1A6NHQ2 334 aaKnown RBP3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 INPP4BO15327 924 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 TBX6O95947 436 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 CHRNA1P02708 482 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 PRKACGP22612 351 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 CALRP27797 417 aaKnown RBP3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 PDHA2P29803 388 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 HSPA1LP34931 641 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF131P52739 623 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 ERVK-16P61578 105 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 RBBP4Q09028 425 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 NFATC2Q13469 925 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 KIAA0141Q14154 515 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 GCKRQ14397 625 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 FAM189A2Q15884 450 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 HKDC1Q2TB90 917 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 ANKRD55Q3KP44 614 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 POM121L1PQ3SYA9 428 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZFP69Q49AA0 526 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 SLC25A24Q6NUK1 477 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 STEAP1BQ6NZ63 245 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 LEG1Q6P5S2 330 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 DPY19L2P2Q6ZN68 376 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 PHC2Q8IXK0 858 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 ARFGAP2Q8N6H7 521 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF614Q8N883 585 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF485Q8NCK3 441 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF248Q8NDW4 579 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 OR1K1Q8NGR3 316 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 TCP11Q8WWU5 503 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 CASD1Q96PB1 797 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms