RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 HLCSP50747 726 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 RPS6KA3P51812 740 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 CDH12P55289 794 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 ISL1P61371 349 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 CD47Q08722 323 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 RBM48Q5RL73 367 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 SAMD14Q8IZD0 417 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 CAMKK1Q8N5S9 505 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 CSNK1A1LQ8N752 337 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 GPR32P1Q8NGA4 272 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 MIPOL1Q8TD10 442 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 APOBEC4Q8WW27 367 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 RASSF5Q8WWW0 418 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 HDAC2Q92769 488 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 CSF3RQ99062 836 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 RBM38Q9H0Z9 239 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 LYRM4Q9HD34 91 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 DDX18Q9NVP1 670 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 DOLKQ9UPQ8 538 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 SLC22A7Q9Y694 548 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 J3KTA2 159 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 DNAJB6O75190 326 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 SERPINB7O75635 380 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 RHCEP18577 417 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 RYKP34925 604 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 FASLGP48023 281 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 KEAP1Q14145 624 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 PUM1Q14671 1186 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 BORAQ6PGQ7 559 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 LRRC25Q8N386 305 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 ARL14Q8N4G2 192 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 TTC29Q8NA56 475 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 CHDHQ8NE62 594 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 NUP43Q8NFH3 380 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 OR4K14Q8NGD5 310 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 PROX1Q92786 737 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 COL21A1Q96P44 957 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 TSC22D3Q99576 134 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 YIPF4Q9BSR8 244 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 MUTYHQ9UIF7 546 aa17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 GPC6Q9Y625 555 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-210ENST00000521667 UBXN7O94888 489 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 CYP4B1P13584 511 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 ST6GAL1P15907 406 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 IL7RP16871 459 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 XKP51811 444 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 CRISP3P54108 245 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 OLR1P78380 273 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 SIM1P81133 766 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 SIM2Q14190 667 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 LTB4RQ15722 352 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 MEP1AQ16819 746 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 CTU2Q2VPK5 515 aaKnown RBP17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 C6orf141Q5SZD1 244 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 KLHL35Q6PF15 583 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 ZNF605Q86T29 641 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 KRT73Q86Y46 540 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 SETD9Q8NE22 299 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 OR10G2Q8NGC3 310 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 OR52J3Q8NH60 311 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 BBS10Q8TAM1 723 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 OTUB1Q96FW1 271 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 HSPA12BQ96MM6 686 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 CCDC3Q9BQI4 270 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 ADNPQ9H2P0 1102 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 SEC14L3Q9UDX4 400 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 ZNF860A6NHJ4 632 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 CDH3P22223 829 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 KCNJ5P48544 419 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 CLK3P49761 638 aaKnown RBP17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 VSX2P58304 361 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 RAPSNQ13702 412 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 GNA13Q14344 377 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 MICAQ29983 383 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 EXOC3L2Q2M3D2 409 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 PRSS41Q7RTY9 318 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 CLDN23Q96B33 292 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 C16orf58Q96GQ5 468 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 SPACA7Q96KW9 195 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 RSPO3Q9BXY4 272 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 UCK1Q9HA47 277 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 BCL2L10Q9HD36 194 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 TMEM74BQ9NUR3 256 aa17.38■□□□□ 0.37
TRAPPC9-210ENST00000521667 CRHBPP24387 322 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 HMGA2P52926 109 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 NXPH1P58417 271 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 LGI4Q8N135 537 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 C19orf47Q8N9M1 422 aaKnown RBP17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 KAT2AQ92830 837 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 TMIGD2Q96BF3 282 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 ZNF354BQ96LW1 612 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 FEVQ99581 238 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 FAM60AQ9NP50 221 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 ACER3Q9NUN7 267 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 SPACA6W5XKT8 324 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 CCDC160A6NGH7 325 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 B4GAT1O43505 415 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 GALR3O60755 368 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 GADD45GO95257 159 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 DCNP07585 359 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms