RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CYP2F1P24903 491 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 GIFP27352 417 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 ADSSP30520 456 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 GSCP56915 257 aaPredicted RBP2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 LY6DQ14210 128 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 RIPPLY2Q5TAB7 128 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 FAM72AQ5TYM5 149 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 RTL6Q6ICC9 239 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 FAM72DQ6L9T8 149 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 KIAA1161Q6NSJ0 714 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 CES3Q6UWW8 571 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 FAM72BQ86X60 149 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 U2AF1L4Q8WU68 220 aaKnown RBP2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 SELENOMQ8WWX9 145 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 NABP1Q96AH0 204 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 TRIM44Q96DX7 344 aaPredicted RBP2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF274Q96GC6 653 aaPredicted RBP2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 LRR1Q96L50 414 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 RBM24Q9BX46 236 aaKnown RBP2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 PARLQ9H300 379 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 FAM124BQ9H5Z6 455 aaPredicted RBP2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 SLC25A19Q9HC21 320 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 TBK1Q9UHD2 729 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 MGAT4BQ9UQ53 548 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 GAB2Q9UQC2 676 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 PPP1R3CQ9UQK1 317 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 SLC6A5Q9Y345 797 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF175Q9Y473 711 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 MFHAS1Q9Y4C4 1052 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 CSNK1G3Q9Y6M4 447 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 SYNJ2O15056 1496 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 FYCO1Q9BQS8 1478 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 DHX57Q6P158 1386 aaKnown RBP2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 PTPN23Q9H3S7 1636 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 A0A0A6YYD4 124 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 LOC390937A0A1W2PQ73 354 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 TRIM49BA6NDI0 452 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 VPS26AO75436 327 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF821O75541 412 aaPredicted RBP2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 CAVIN2O95810 425 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 IGHG1P01857 330 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 HMBSP08397 361 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 PRKAR1AP10644 381 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 DRD5P21918 477 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ACADSBP45954 432 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 NUMBP49757 651 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 CRYBA2P53672 197 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 CARTPTQ16568 116 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 CCL14Q16627 93 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 CDKN3Q16667 212 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 TMEM30BQ3MIR4 351 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF876PQ49A33 203 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ARSKQ6UWY0 536 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 Q6ZRG5 221 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 MCM10Q7L590 875 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 CUZD1Q86UP6 607 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF573Q86YE8 665 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ARFGAP2Q8N6H7 521 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 FADS6Q8N9I5 356 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 BANPQ8N9N5 519 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 LEMD2Q8NC56 503 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 DDHD1Q8NEL9 900 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 OR9Q2Q8NGE9 314 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 OR10G7Q8NGN6 311 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 OR6S1Q8NH40 331 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 RPLP0P6Q8NHW5 317 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 CCDC110Q8TBZ0 833 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 MRGPRDQ8TDS7 321 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF606Q8WXB4 792 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ARHGAP45Q92619 1136 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ADIPOR1Q96A54 375 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ALKBH3Q96Q83 286 aaPredicted RBP2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 GPA33Q99795 319 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 ERP44Q9BS26 406 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 THUMPD2Q9BTF0 503 aaKnown RBP2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 CLEC7AQ9BXN2 247 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 TEX13BQ9BXU2 312 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 LRRCC1Q9C099 1032 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 DPH5Q9H2P9 285 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 YAE1D1Q9NRH1 226 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 TMOD2Q9NZR1 351 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 KLHL8Q9P2G9 620 aaPredicted RBP2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 KLK11Q9UBX7 282 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 CACNG5Q9UF02 275 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 B9D1Q9UPM9 204 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 AQRO60306 1485 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 SNAPC4Q5SXM2 1469 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 METP08581 1390 aa2.87□□□□□ -1.95
HMGN1P28-201ENST00000521340 TARBP1Q13395 1621 aaKnown RBP2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 LRRC9Q6ZRR7 1453 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 FAM230AA0A1W2PPH8 454 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 ESYT2A0FGR8 921 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 MEI4A8MW99 385 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 EPM2AB3EWF7 344 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 BUB1O43683 1085 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 SNAP91O60641 907 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 NOL3O60936 208 aaKnown RBP2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 SCGB2A1O75556 95 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 TOM1L1O75674 476 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF432O94892 652 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms