RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 KRT87PA6NCN2 255 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 A8MUA0 341 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 A8MXE2 369 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 E5RI56 91 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 G3V3Y1 287 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 WWP2O00308 870 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 CD3EAPO15446 510 aaKnown RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 NDUFS3O75489 264 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ACTL6AO96019 429 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ESR1P03372 595 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 HPNP05981 417 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 CRHP06850 196 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 CCL3P10147 92 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 CYP4B1P13584 511 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ENO3P13929 434 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 SRD5A1P18405 259 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF10P21506 573 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ADRA1DP25100 572 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 HPDP32754 393 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 CPOXP36551 454 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 SKIV2L2P42285 1042 aaKnown RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 HK2P52789 917 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 TBPL1P62380 186 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 RPS4XP62701 263 aaKnown RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 PLIN5Q00G26 463 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 BMPR2Q13873 1038 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 RCN2Q14257 317 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 FGFBP1Q14512 234 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 SPARCL1Q14515 664 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 SQLEQ14534 574 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 PDCD2Q16342 344 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ZSCAN26Q16670 478 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 TTLL9Q3SXZ7 439 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 DEFB134Q4QY38 66 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 XKR6Q5GH73 641 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 TEX35Q5T0J7 233 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 UBAP2Q5T6F2 1119 aaKnown RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ARMC3Q5W041 872 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 LRRC8EQ6NSJ5 796 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 MRNIPQ6NTE8 343 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 CDPF1Q6NVV7 123 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 WDR93Q6P2C0 686 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 CFAP161Q6P656 301 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 DARS2Q6PI48 645 aaKnown RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF534Q76KX8 674 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 LUZP2Q86TE4 346 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 C17orf64Q86WR6 236 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 MEX3DQ86XN8 651 aaKnown RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 SCUBE1Q8IWY4 988 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF595Q8IYB9 648 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 LRRC56Q8IYG6 542 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 SYCE1Q8N0S2 351 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 MMGT1Q8N4V1 131 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF611Q8N823 705 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 PPFIBP2Q8ND30 876 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 NUBPLQ8TB37 319 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 NT5CQ8TCD5 201 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 FBLIM1Q8WUP2 373 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 KIAA1191Q96A73 305 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 DTNBP1Q96EV8 351 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 PBKQ96KB5 322 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 RHOVQ96L33 236 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF597Q96LX8 424 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 PKP4Q99569 1192 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 SLC39A3Q9BRY0 314 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 HAUS8Q9BT25 410 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 FAM167BQ9BTA0 163 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 RSRP1Q9BUV0 290 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 NPLQ9BXD5 320 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 SLC6A15Q9H2J7 730 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 BARX1Q9HBU1 254 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 SH2D2AQ9NP31 389 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 NECTIN3Q9NQS3 549 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 PNO1Q9NRX1 252 aaKnown RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 FAM53CQ9NYF3 392 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 ELOVL5Q9NYP7 299 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 COPS7AQ9UBW8 275 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 V9GYY5 206 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-207ENST00000520168 GOLGA6L10A0A0M3HER8 536 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 TRBC2A0A5B9 178 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 CAPN14A8MX76 684 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 H0Y3Z8 333 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 GFYI3L273 518 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 EIF3FO00303 357 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-207ENST00000520168 HS3ST1O14792 307 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 KCNAB3O43448 404 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 PRKNO60260 465 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-207ENST00000520168 CDH16O75309 829 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 SKAP2O75563 359 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-207ENST00000520168 SYF2O95926 243 aaKnown RBP4.45□□□□□ -1.7
SDCBP-207ENST00000520168 C1QAP02745 245 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF888P0CJ79 500 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-207ENST00000520168 MPC1LP0DKB6 136 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 CPN1P15169 458 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 PPP3CBP16298 524 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 PAMP19021 973 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 HNF1AP20823 631 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 COMTP21964 271 aa4.45□□□□□ -1.7
SDCBP-207ENST00000520168 GRK2P25098 689 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms