RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 KLHL1Q9NR64 748 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 LRFN1Q9P244 771 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 TMED5Q9Y3A6 229 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 NPIPB8E9PQR5 432 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 OR2J2O76002 312 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 IGKV3-11P04433 115 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 CT62P0C5K7 136 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 CD46P15529 392 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 SDC1P18827 310 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 DDCP20711 480 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 NTSP30990 170 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 SSTR4P31391 388 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 RPL14P50914 215 aaKnown RBP13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 KIAA0040Q15053 153 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 LTB4RQ15722 352 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 RFTN2Q52LD8 501 aaPredicted RBP13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 XKR7Q5GH72 579 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 ZNF468Q5VIY5 522 aaPredicted RBP13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 ATG16L1Q676U5 607 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 FAM71E1Q6IPT2 247 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 FAM180AQ6UWF9 173 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 IKBIPQ70UQ0 350 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 TICAM1Q8IUC6 712 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 C9orf40Q8IXQ3 194 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 SAMD14Q8IZD0 417 aaPredicted RBP13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 CYP4Z2PQ8N1L4 340 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 VWA5B2Q8N398 1253 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 FNDC5Q8NAU1 212 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 ADCY4Q8NFM4 1077 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 OR8K3Q8NH51 312 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 CLHC1Q8NHS4 586 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 GFM2Q969S9 779 aaKnown RBP13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 TMEM125Q96AQ2 219 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 BBS4Q96RK4 519 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 SORT1Q99523 831 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 C1orf50Q9BV19 199 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 C20orf27Q9GZN8 174 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 ACBD3Q9H3P7 528 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 SLC35C2Q9NQQ7 365 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 EHD3Q9NZN3 535 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 MYOTQ9UBF9 498 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 BCAP29Q9UHQ4 241 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 ERVK-11Q9UQG0 969 aa13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 YARS2Q9Y2Z4 477 aaKnown RBP13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 COPG1Q9Y678 874 aaKnown RBP13.52□□□□□ -0.25
TOP1MT-203ENST00000517857 OR6C76A6NM76 312 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 A8MVJ9 347 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 HMGB1P1B2RPK0 211 aaPredicted RBP13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 AKAP10O43572 662 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 SLC25A12O75746 678 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 LRATO95237 230 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 ATP1B1P05026 303 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 TACR1P25103 407 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 HLCSP50747 726 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 DUSP2Q05923 314 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 IGFBP7Q16270 282 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 HLA-DQA1Q5Y7H0 255 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 SPINK14Q6IE38 97 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 FAM111BQ6SJ93 734 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 ATCAYQ86WG3 371 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 CCDC116Q8IYX3 515 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 FAM9CQ8IZT9 166 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 ARMC10Q8N2F6 343 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 TMEM178AQ8NBL3 297 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 MDS2Q8NDY4 140 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 NUBPLQ8TB37 319 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 RAB3IL1Q8TBN0 382 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 SLC22A8Q8TCC7 542 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 SNRNP40Q96DI7 357 aaKnown RBP13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 EGLN2Q96KS0 407 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 FCRL1Q96LA6 429 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 RASL10BQ96S79 203 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 SH3GL2Q99962 352 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 HES7Q9BYE0 225 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 ASF1BQ9NVP2 202 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 HPF1Q9NWY4 346 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 MAT2BQ9NZL9 334 aa13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 WBP11Q9Y2W2 641 aaKnown RBP13.51□□□□□ -0.25
TOP1MT-203ENST00000517857 SHANK1Q9Y566 2161 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 TMEM200CA6NKL6 621 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 CDK2AP1O14519 115 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 VPS4BO75351 444 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 RASAL1O95294 804 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 JUNP05412 331 aaKnown RBP13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 TRHRP34981 398 aaPredicted RBP13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 HPCAL1P37235 193 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 SOX3P41225 446 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 ASMTP46597 345 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 NCBP2P52298 156 aaKnown RBP eCLIP13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 SLC37A1P57057 533 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 EXOSC7Q15024 291 aaKnown RBP13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 EBPQ15125 230 aaKnown RBP13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 INAQ16352 499 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 MAPKAPK3Q16644 382 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 PRICKLE4Q2TBC4 344 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 IL20RBQ6UXL0 311 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 LIX1Q8N485 282 aa13.5□□□□□ -0.25
TOP1MT-203ENST00000517857 FAM98AQ8NCA5 519 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms