RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TMEM139Q8IV31 216 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 STHQ8IWL8 128 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 MMD2Q8IY49 270 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 ZNF440Q8IYI8 595 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 LYG1Q8N1E2 194 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 THEM5Q8N1Q8 247 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 PRSS35Q8N3Z0 413 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 TMEM99Q8N816 258 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 NIPA2Q8N8Q9 360 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 CCDC63Q8NA47 563 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 OR11H4Q8NGC9 324 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 OR52M1Q8NGK5 317 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 OR2T6Q8NHC8 308 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 CTNNBL1Q8WYA6 563 aaPredicted RBP2.76□□□□□ -1.97
HERC4-215ENST00000515753 HAS2Q92819 552 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 TSACCQ96A04 125 aaPredicted RBP2.76□□□□□ -1.97
HERC4-215ENST00000515753 FAM46BQ96A09 425 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 ESAMQ96AP7 390 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 GUCD1Q96NT3 240 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 PCDHB18PQ96TA0 734 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 FICDQ9BVA6 458 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 ZNF416Q9BWM5 594 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 LRRC2Q9BYS8 371 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 NACAP1Q9BZK3 213 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 SLC39A8Q9C0K1 460 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 OR2B2Q9GZK3 357 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 ZMYND12Q9H0C1 365 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 SDCBP2Q9H190 292 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 TMEM231Q9H6L2 316 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 ATP13A3Q9H7F0 1226 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 C10orf88Q9H8K7 445 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 FARSBQ9NSD9 589 aaKnown RBP2.76□□□□□ -1.97
HERC4-215ENST00000515753 FAM207AQ9NSI2 230 aaPredicted RBP2.76□□□□□ -1.97
HERC4-215ENST00000515753 CNOT2Q9NZN8 540 aaKnown RBP2.76□□□□□ -1.97
HERC4-215ENST00000515753 ASIC3Q9UHC3 531 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 DAPK2Q9UIK4 370 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 MAN1B1Q9UKM7 699 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 MRPS2Q9Y399 296 aaKnown RBP2.76□□□□□ -1.97
HERC4-215ENST00000515753 TMED3Q9Y3Q3 217 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 SLIT3O75094 1523 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 PPLO60437 1756 aa2.76□□□□□ -1.97
HERC4-215ENST00000515753 EDC4Q6P2E9 1401 aaKnown RBP2.76□□□□□ -1.97
HERC4-215ENST00000515753 RTL1A6NKG5 1358 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 MYO5BQ9ULV0 1848 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 PCNX3Q9H6A9 2034 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 NOTCH2Q04721 2471 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 IGLV7-46A0A075B6I9 117 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 IGKV6D-41A0A0C4DH26 115 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 ANKRD61A6NGH8 418 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 H7C423 109 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 M0R296 226 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 CHADO15335 359 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 MAGEB3O15480 346 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 PSMD3O43242 534 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 CLN5O75503 358 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 GRAP2O75791 330 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 CDK2AP2O75956 126 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 RHOBTB1O94844 696 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 MFN2O95140 757 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 CALCBP10092 127 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 RALAP11233 206 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 SFTPCP11686 197 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 HNRNPA2B1P22626 353 aaKnown RBP2.75□□□□□ -1.97
HERC4-215ENST00000515753 GLRA2P23416 452 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 PSMA5P28066 241 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 SSTR1P30872 391 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 RFC4P35249 363 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 CSRP3P50461 194 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 GUCY2DQ02846 1103 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 HSF2Q03933 536 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 GABPB1Q06547 395 aaPredicted RBP2.75□□□□□ -1.97
HERC4-215ENST00000515753 RASGEF1BQ0VAM2 473 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 NONOQ15233 471 aaKnown RBP eCLIP2.75□□□□□ -1.97
HERC4-215ENST00000515753 SGSM1Q2NKQ1 1148 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 MAJINQ3KP22 176 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 TMEM41BQ5BJD5 291 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 ARMCX4Q5H9R4 360 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 BSPRYQ5W0U4 402 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 UGT3A1Q6NUS8 523 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 TTC27Q6P3X3 843 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 IL17RELQ6ZVW7 336 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 STXBP4Q6ZWJ1 553 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 VASH2Q86V25 355 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 LACC1Q8IV20 430 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 LGI2Q8N0V4 545 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 RAB42Q8N4Z0 105 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 CERS5Q8N5B7 392 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 FADS6Q8N9I5 356 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 MINDY2Q8NBR6 621 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 OR10Q1Q8NGQ4 319 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 OR4A16Q8NH70 328 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 GATAD1Q8WUU5 269 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 SELENOMQ8WWX9 145 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 CCDC51Q96ER9 411 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 CNDP1Q96KN2 507 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 FAM20AQ96MK3 541 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 MAP3K3Q99759 626 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 COQ7Q99807 217 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 PRMT1Q99873 361 aaKnown RBP2.75□□□□□ -1.97
HERC4-215ENST00000515753 SYT11Q9BT88 431 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms