RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 DYRK3O43781 588 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 PCDH7O60245 1069 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 SLC19A2O60779 497 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 CRCPO75575 148 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 NADKO95544 446 aaPredicted RBP10.62□□□□□ -0.71
VCAN-212ENST00000515397 SOX18P35713 384 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 DNASE1L1P49184 302 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 PLGLB1Q02325 96 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 NNATQ16517 81 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 PRSS53Q2L4Q9 553 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 PRAMEF20Q5VT98 475 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 DESI1Q6ICB0 168 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 SLC48A1Q6P1K1 146 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 FRMD7Q6ZUT3 714 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 TRABD2AQ86V40 505 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 CHERPQ8IWX8 916 aaKnown RBP10.62□□□□□ -0.71
VCAN-212ENST00000515397 CCDC116Q8IYX3 515 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 BANPQ8N9N5 519 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 FAM98AQ8NCA5 519 aaKnown RBP10.62□□□□□ -0.71
VCAN-212ENST00000515397 OR2M7Q8NG81 312 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 OR8K3Q8NH51 312 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 C16orf78Q8WTQ4 265 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.62□□□□□ -0.71
VCAN-212ENST00000515397 KLHL29Q96CT2 875 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 FAM111AQ96PZ2 611 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 BRINP2Q9C0B6 783 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 WWTR1Q9GZV5 400 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 PFDN4Q9NQP4 134 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 NMRK1Q9NWW6 199 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 DTX4Q9Y2E6 619 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 PLLPQ9Y342 182 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 EML6Q6ZMW3 1958 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 ZNF407Q9C0G0 2248 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 A0A1B0GTH9 108 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 C1orf226A1L170 272 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 SYNDIG1LA6NDD5 238 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 ENO1P06733 434 aaKnown RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 ANXA4P09525 319 aaPredicted RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 NUDT17P0C025 328 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 S1PR1P21453 382 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 CNR1P21554 472 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 ALDH3A1P30838 453 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 DNAJB13P59910 316 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 PPIAP62937 165 aaKnown RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 MRPS35P82673 323 aaKnown RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 ACSM2AQ08AH3 577 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 MGAT2Q10469 447 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 CSTF3Q12996 717 aaKnown RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 DUSP8Q13202 625 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 BIKQ13323 160 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 PCLAFQ15004 111 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 EBPQ15125 230 aaKnown RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 IMPG1Q17R60 797 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 SPRED3Q2MJR0 410 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 ZNF791Q3KP31 576 aaPredicted RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 TRMT12Q53H54 448 aaKnown RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 KRTCAP3Q53RY4 240 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 CMPK2Q5EBM0 449 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 C10orf62Q5T681 223 aaPredicted RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 LIPMQ5VYY2 423 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 ACSM2BQ68CK6 577 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 WDR93Q6P2C0 686 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 OPN5Q6U736 354 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 LYPD8Q6UX82 237 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 RTL4Q6ZR62 310 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 ZCCHC23Q6ZST2 131 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 SLC29A4Q7RTT9 530 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 SPPL2CQ8IUH8 684 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 GALNT12Q8IXK2 581 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 ZNF615Q8N8J6 731 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 GBP7Q8N8V2 638 aaPredicted RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 FAM13CQ8NE31 585 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 OR10G3Q8NGC4 313 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 KAT2AQ92830 837 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 EXOSC8Q96B26 276 aaKnown RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 CCDC126Q96EE4 140 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 CNRIP1Q96F85 164 aaPredicted RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 ART5Q96L15 291 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 OR10A5Q9H207 317 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 PPCSQ9HAB8 311 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 TNFRSF10DQ9UBN6 386 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 BCAP29Q9UHQ4 241 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 MCM8Q9UJA3 840 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 UTS2RQ9UKP6 389 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 POLR3HQ9Y535 204 aaPredicted RBP10.61□□□□□ -0.71
VCAN-212ENST00000515397 HRH3Q9Y5N1 445 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 GTF3C1Q12789 2109 aa10.61□□□□□ -0.71
VCAN-212ENST00000515397 A0A1B0GUH1 482 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 C2orf92A0A1B0GVN3 265 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 TMEM233B4DJY2 109 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 GUCY1B2O75343 617 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 CHRNGP07510 517 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 CELA3AP09093 270 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 LINC00032P0C843 101 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 HSD3B1P14060 373 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 PCSK2P16519 638 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 HSD3B2P26439 372 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 CA7P43166 264 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 RBPJQ06330 500 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 C2orf80Q0P641 193 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms