RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ATP6AP1LQ52LC2 224 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 C6orf136Q5SQH8 315 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 ZNF468Q5VIY5 522 aaPredicted RBP12.96□□□□□ -0.33
USP46-209ENST00000514536 TUBA3EQ6PEY2 450 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 FAM111BQ6SJ93 734 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 TICAM1Q8IUC6 712 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 CCDC116Q8IYX3 515 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 ARMC10Q8N2F6 343 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 LRRC25Q8N386 305 aaPredicted RBP12.96□□□□□ -0.33
USP46-209ENST00000514536 ADCY4Q8NFM4 1077 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 OR8K3Q8NH51 312 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 CLHC1Q8NHS4 586 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 RAB3IL1Q8TBN0 382 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 ZNF75CPQ92670 426 aaPredicted RBP12.96□□□□□ -0.33
USP46-209ENST00000514536 GFM2Q969S9 779 aaKnown RBP12.96□□□□□ -0.33
USP46-209ENST00000514536 TSSK3Q96PN8 268 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 BRINP2Q9C0B6 783 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 SLC35C2Q9NQQ7 365 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 EHD3Q9NZN3 535 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 EXO1Q9UQ84 846 aaKnown RBP12.96□□□□□ -0.33
USP46-209ENST00000514536 CNTRLQ7Z7A1 2325 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 TRAV17A0A0B4J275 112 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 AKAP10O43572 662 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 LRATO95237 230 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 ATP1B1P05026 303 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 BCKDHAP12694 445 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 SSTR4P31391 388 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 HK2P52789 917 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 TLE1Q04724 770 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 C6orf163Q5TEZ5 329 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 RNF111Q6ZNA4 994 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 IKBIPQ70UQ0 350 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 C9orf40Q8IXQ3 194 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 KIRREL3Q8IZU9 778 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 CISD2Q8N5K1 135 aaKnown RBP12.95□□□□□ -0.34
USP46-209ENST00000514536 FNDC5Q8NAU1 212 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 OR5L2Q8NGL0 311 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 SIGLEC12Q96PQ1 595 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 C1orf50Q9BV19 199 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 MIEF1Q9NQG6 463 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 GIMAP4Q9NUV9 329 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 MYOTQ9UBF9 498 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 YARS2Q9Y2Z4 477 aaKnown RBP12.95□□□□□ -0.34
USP46-209ENST00000514536 TENM4Q6N022 2769 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 BOD1L1Q8NFC6 3051 aa12.95□□□□□ -0.34
USP46-209ENST00000514536 SETXQ7Z333 2677 aaKnown RBP12.95□□□□□ -0.34
USP46-209ENST00000514536 OR2J2O76002 312 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 CLPSP04118 112 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 KITP10721 976 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 S1PR1P21453 382 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 MAPK1P28482 360 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 SLC37A1P57057 533 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 PPP2R2AP63151 447 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 MGAT2Q10469 447 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 FUT7Q11130 342 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 MAP4K2Q12851 820 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 OR1C1Q15619 314 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 LTB4RQ15722 352 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 INPP5JQ15735 1006 aaPredicted RBP12.94□□□□□ -0.34
USP46-209ENST00000514536 PRICKLE4Q2TBC4 344 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 IL23RQ5VWK5 629 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 SPINK14Q6IE38 97 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 SAMD14Q8IZD0 417 aaPredicted RBP12.94□□□□□ -0.34
USP46-209ENST00000514536 LIX1Q8N485 282 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 TMEM156Q8N614 296 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 SUN3Q8TAQ9 357 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 BBS4Q96RK4 519 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 NUF2Q9BZD4 464 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 TRIM4Q9C037 500 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 AKTIPQ9H8T0 292 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP46-209ENST00000514536 TAS2R7Q9NYW3 318 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 MAT2BQ9NZL9 334 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 LRFN1Q9P244 771 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 ENTPD4Q9Y227 616 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 PCDHGA10Q9Y5H3 936 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 FLNBO75369 2602 aaKnown RBP12.94□□□□□ -0.34
USP46-209ENST00000514536 ASH1LQ9NR48 2969 aaKnown RBP12.94□□□□□ -0.34
USP46-209ENST00000514536 KLF11O14901 512 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 PRAMEF2O60811 474 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 MPIP34949 423 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 SOX18P35713 384 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 CYB561P49447 251 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 HLCSP50747 726 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 SSR4P51571 173 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 OCRLQ01968 901 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 TRMT12Q53H54 448 aaKnown RBP12.94□□□□□ -0.34
USP46-209ENST00000514536 PRR30Q53SZ7 412 aaPredicted RBP12.94□□□□□ -0.34
USP46-209ENST00000514536 ANKRD26P1Q6NSI1 321 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 SLC29A4Q7RTT9 530 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 VWA5B2Q8N398 1253 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 MDS2Q8NDY4 140 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 CPT1CQ8TCG5 803 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 OR10A5Q9H207 317 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 REEP4Q9H6H4 257 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 MAP10Q9P2G4 905 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 MARCOQ9UEW3 520 aaPredicted RBP12.94□□□□□ -0.34
USP46-209ENST00000514536 BCAP29Q9UHQ4 241 aa12.94□□□□□ -0.34
USP46-209ENST00000514536 MYO1GB0I1T2 1018 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms