RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 AGFG1P52594 562 aaKnown RBP12.73□□□□□ -0.37
SPCS3-204ENST00000513139 GPX6P59796 221 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 TGM3Q08188 693 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 BIKQ13323 160 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 PPP1R3AQ16821 1122 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 RBM20Q5T481 1227 aaKnown RBP12.73□□□□□ -0.37
SPCS3-204ENST00000513139 BLOC1S3Q6QNY0 202 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 SLCO4C1Q6ZQN7 724 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 GALNT7Q86SF2 657 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 KRT78Q8N1N4 520 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 OR10G3Q8NGC4 313 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 CCT6BQ92526 530 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 ART5Q96L15 291 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 TRIB1Q96RU8 372 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 FMO2Q99518 471 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 SFXN3Q9BWM7 321 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 UBQLN3Q9H347 655 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 COPS7BQ9H9Q2 264 aaPredicted RBP12.73□□□□□ -0.37
SPCS3-204ENST00000513139 PPANQ9NQ55 473 aaKnown RBP12.73□□□□□ -0.37
SPCS3-204ENST00000513139 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPCS3-204ENST00000513139 SLC17A6Q9P2U8 582 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 CAMK2AQ9UQM7 478 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 USF3Q68DE3 2245 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 TRIM64A6NGJ6 449 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 TRIM64BA6NI03 449 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 DYRK3O43781 588 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 TRAPPC6AO75865 159 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 AHSGP02765 367 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 PCYT1AP49585 367 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 CDK9P50750 372 aaKnown RBP12.72□□□□□ -0.37
SPCS3-204ENST00000513139 IGLV3-21P80748 117 aaPredicted RBP12.72□□□□□ -0.37
SPCS3-204ENST00000513139 CDKL1Q00532 357 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 RCAN2Q14206 197 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 SLBPQ14493 270 aaKnown RBP eCLIP12.72□□□□□ -0.37
SPCS3-204ENST00000513139 NTRK2Q16620 822 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 C3orf62Q6ZUJ4 267 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 RETREG3Q86VR2 466 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 ZPLD1Q8TCW7 415 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 ANKRD9Q96BM1 317 aaPredicted RBP12.72□□□□□ -0.37
SPCS3-204ENST00000513139 CERS2Q96G23 380 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 WDYHV1Q96HA8 205 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 FBXL20Q96IG2 436 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 CCL19Q99731 98 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 ROGDIQ9GZN7 287 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 PRDM7Q9NQW5 492 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
SPCS3-204ENST00000513139 SNX4O95219 450 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 CNOT4O95628 575 aaKnown RBP12.71□□□□□ -0.37
SPCS3-204ENST00000513139 MSH2P43246 934 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 STT3AP46977 705 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 CPA2P48052 419 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 KCNC1P48547 511 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 VSNL1P62760 191 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 EEF1A1P68104 462 aaKnown RBP12.71□□□□□ -0.37
SPCS3-204ENST00000513139 ACKR1Q16570 336 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 TEDDM1Q5T9Z0 273 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 EEF1A1P5Q5VTE0 462 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 CNTN4Q8IWV2 1026 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 C9orf106Q8NAJ2 232 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 SRFBP1Q8NEF9 429 aaKnown RBP12.71□□□□□ -0.37
SPCS3-204ENST00000513139 RBM18Q96H35 190 aaKnown RBP12.71□□□□□ -0.37
SPCS3-204ENST00000513139 DGAT2Q96PD7 388 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 KCNC2Q96PR1 638 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 TM9SF2Q99805 663 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 CAPS2Q9BXY5 557 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 UGT2B28Q9BY64 529 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 GSX2Q9BZM3 304 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 PHACTR1Q9C0D0 580 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 ACBD3Q9H3P7 528 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 PIGMQ9H3S5 423 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 EHD1Q9H4M9 534 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 SMYD2Q9NRG4 433 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 MOCS1Q9NZB8 636 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 NINJ2Q9NZG7 142 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 FETUBQ9UGM5 382 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 CORO1CQ9ULV4 474 aaPredicted RBP12.71□□□□□ -0.37
SPCS3-204ENST00000513139 NPFFR2Q9Y5X5 522 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 SPACA6W5XKT8 324 aa12.71□□□□□ -0.37
SPCS3-204ENST00000513139 CUBNO60494 3623 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 TCRBV9S1A1TA0A576 114 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 CAPN14A8MX76 684 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 CXorf49A8MYA2 514 aaPredicted RBP12.7□□□□□ -0.38
SPCS3-204ENST00000513139 TP53I11O14683 189 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 CTIFO43310 598 aaKnown RBP12.7□□□□□ -0.38
SPCS3-204ENST00000513139 RCBTB2O95199 551 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 ACSL3O95573 720 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 ACTL6AO96019 429 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 MC3RP41968 323 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 MGAT5Q09328 741 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 FRG1Q14331 258 aaKnown RBP12.7□□□□□ -0.38
SPCS3-204ENST00000513139 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 SLC29A4Q7RTT9 530 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 VN1R5Q7Z5H4 357 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 LUZP2Q86TE4 346 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 PPP1R14CQ8TAE6 165 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 DIO2Q92813 273 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 ABTB1Q969K4 478 aaPredicted RBP12.7□□□□□ -0.38
SPCS3-204ENST00000513139 PERPQ96FX8 193 aa12.7□□□□□ -0.38
SPCS3-204ENST00000513139 UCN2Q96RP3 112 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms