RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 TUBB8Q3ZCM7 444 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 FAM174BQ3ZCQ3 159 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 TIGD2Q4W5G0 525 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 SPANXN4Q5MJ08 99 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 B3GNTL1Q67FW5 361 aaPredicted RBP5.05□□□□□ -1.6
PROM1-211ENST00000511153 OR4F3Q6IEY1 312 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 OR52E8Q6IFG1 317 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 FAM71E1Q6IPT2 247 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 PAPD4Q6PIY7 484 aaKnown RBP5.05□□□□□ -1.6
PROM1-211ENST00000511153 KIRREL2Q6UWL6 708 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 TMEM107Q6UX40 140 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 TMEM64Q6YI46 380 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 CPEB2Q7Z5Q1 589 aaKnown RBP5.05□□□□□ -1.6
PROM1-211ENST00000511153 MRGPREQ86SM8 312 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 PROSER1Q86XN7 944 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 ZCCHC7Q8N3Z6 543 aaKnown RBP5.05□□□□□ -1.6
PROM1-211ENST00000511153 POU5F2Q8N7G0 328 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 OR4K14Q8NGD5 310 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 OR2Y1Q8NGV0 311 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 OR5AK3PQ8NH89 298 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 DNAJB14Q8TBM8 379 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 C10orf82Q8WW14 230 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 EDARADDQ8WWZ3 215 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 METTL21AQ8WXB1 218 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 VPS33AQ96AX1 596 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 MVB12AQ96EY5 273 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 SEC16BQ96JE7 1060 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 LRFN5Q96NI6 719 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 DGAT2Q96PD7 388 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 BBS4Q96RK4 519 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 CCT8L2Q96SF2 557 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 YIPF4Q9BSR8 244 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 INPP5KQ9BT40 448 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 FAIM2Q9BWQ8 316 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 NPLQ9BXD5 320 aaPredicted RBP5.05□□□□□ -1.6
PROM1-211ENST00000511153 TRIM8Q9BZR9 551 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 ROGDIQ9GZN7 287 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 RASSF4Q9H2L5 321 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 CCDC134Q9H6E4 229 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 P4HTMQ9NXG6 502 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 ANKRD10Q9NXR5 420 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 CCDC167Q9P0B6 97 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 BCAP29Q9UHQ4 241 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 ERVK-19Q9WJR5 959 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 ENTPD4Q9Y227 616 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 MAN2B2Q9Y2E5 1009 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 PADI2Q9Y2J8 665 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 TSC22D4Q9Y3Q8 395 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 GPR45Q9Y5Y3 372 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 ACACBO00763 2458 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 PTPRQQ9UMZ3 2332 aa5.05□□□□□ -1.6
PROM1-211ENST00000511153 ANKRD11Q6UB99 2663 aaPredicted RBP5.05□□□□□ -1.6
PROM1-211ENST00000511153 TRBV11-1A0A0K0K1C0 115 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 LOC100653049A0A140TA62 436 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SRRM3A6NNA2 597 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 ZNF891A8MT65 544 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 ADARB2-AS1A8MUL3 147 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 C21orf140B9A014 251 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 PEX12O00623 359 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 FCHO1O14526 889 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SCAMP2O15127 329 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 OIP5O43482 229 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CTNSO60931 367 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SLC22A3O75751 556 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 KRT34O76011 436 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SCELO95171 688 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 GPR75O95800 540 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ALBP02768 609 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 RAB40ALP0C0E4 278 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ITGAMP11215 1152 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 COX6A1P12074 109 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CPMP14384 443 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 DDCP20711 480 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 GPX3P22352 226 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 JAK1P23458 1154 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ITGA3P26006 1051 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 MC3RP41968 323 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CDKN2CP42773 168 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CPA2P48052 419 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 RFX3P48380 749 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 STX1BP61266 288 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 RPS26P62854 115 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 SKP1P63208 163 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 PHC1P78364 1004 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 Q0VFX4 171 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CDC20Q12834 499 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 PCOLCEQ15113 449 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 COL28A1Q2UY09 1125 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SPDYE7PQ495Y7 208 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 GTDC1Q4AE62 458 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 VPS26BQ4G0F5 336 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 TRMT12Q53H54 448 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 CPTPQ5TA50 214 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 BROXQ5VW32 411 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SLC48A1Q6P1K1 146 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SLC2A7Q6PXP3 512 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 IGF2-ASQ6U949 168 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ZNF517Q6ZMY9 492 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 LINC00696Q6ZRV3 163 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 OLIG3Q7RTU3 272 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms