RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 RDH11Q8TC12 318 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 PIWIL2Q8TC59 973 aaKnown RBP9.56□□□□□ -0.88
PFDN1-203ENST00000510217 SLC2A12Q8TD20 617 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 DAZLQ92904 295 aaKnown RBP9.56□□□□□ -0.88
PFDN1-203ENST00000510217 TMEM125Q96AQ2 219 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 RGMAQ96B86 450 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 PHF21BQ96EK2 531 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 CCDC120Q96HB5 630 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 CDK15Q96Q40 435 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 MYCBPQ99417 103 aaPredicted RBP9.56□□□□□ -0.88
PFDN1-203ENST00000510217 CADM1Q9BY67 442 aaKnown RBP9.56□□□□□ -0.88
PFDN1-203ENST00000510217 NMUR2Q9GZQ4 415 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 IPPKQ9H8X2 491 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 LIN28AQ9H9Z2 209 aaKnown RBP9.56□□□□□ -0.88
PFDN1-203ENST00000510217 ZBTB26Q9HCK0 441 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 PRM3Q9NNZ6 103 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 TAGLN3Q9UI15 199 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 SH3BGRL2Q9UJC5 107 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 TINAGQ9UJW2 476 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 PCTPQ9UKL6 214 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 ZNF835Q9Y2P0 537 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 RNF11Q9Y3C5 154 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 L3MBTL1Q9Y468 752 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 PCDHGA11Q9Y5H2 935 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 TNPO3Q9Y5L0 923 aaKnown RBP9.56□□□□□ -0.88
PFDN1-203ENST00000510217 CLCA3PQ9Y6N3 262 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 SPACA6W5XKT8 324 aa9.56□□□□□ -0.88
PFDN1-203ENST00000510217 A0A1B0GTL3 188 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 C17orf105B2RV13 164 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 TMEM114B3SHH9 223 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 NPIPA5E9PKD4 350 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 GSC2O15499 205 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 TMPRSS11DO60235 418 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 EEDO75530 441 aaKnown RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 OR2J2O76002 312 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 ZFAND5O76080 213 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 MLYCDO95822 493 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 RPS17P08708 135 aaKnown RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 RBP1P09455 135 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 SBK3P0C264 359 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 COL6A2P12110 1019 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 GCKP35557 465 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 BSGP35613 385 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 MEOX1P50221 254 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 ARFIP1P53367 373 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 AQP5P55064 265 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 GPR85P60893 370 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 PHEXP78562 749 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 HSF1Q00613 529 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 FOLH1Q04609 750 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 C3AR1Q16581 482 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 FAM219BQ5XKK7 198 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 C18orf63Q68DL7 685 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 HSDL2Q6YN16 418 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 Q6ZPB1 254 aaPredicted RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 RPS27LQ71UM5 84 aaKnown RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 MDGA2Q7Z553 956 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 SULF2Q8IWU5 870 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 OR4N5Q8IXE1 308 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 TMEM156Q8N614 296 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 OR8K3Q8NH51 312 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 ZNF721Q8TF20 911 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 ITLN2Q8WWU7 325 aaPredicted RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 REPS1Q96D71 796 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 MAGED4Q96JG8 741 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 SCYL1Q96KG9 808 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 RASL10BQ96S79 203 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 CENPKQ9BS16 269 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 CCDC106Q9BWC9 280 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 OR8D2Q9GZM6 311 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 C1orf21Q9H246 121 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 DENND2DQ9H6A0 471 aaPredicted RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 RPF2Q9H7B2 306 aaKnown RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 NOL11Q9H8H0 719 aaKnown RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 MS4A12Q9NXJ0 267 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 MYOTQ9UBF9 498 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 STOML1Q9UBI4 398 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 PHF11Q9UIL8 331 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 TMCO1Q9UM00 188 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 PPT2Q9UMR5 302 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 NPIPA1Q9UND3 350 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 KLF13Q9Y2Y9 288 aaPredicted RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 YARS2Q9Y2Z4 477 aaKnown RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 ATG4BQ9Y4P1 393 aa9.55□□□□□ -0.88
PFDN1-203ENST00000510217 NCOA6Q14686 2063 aaPredicted RBP9.55□□□□□ -0.88
PFDN1-203ENST00000510217 UNC79Q9P2D8 2635 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 DIDO1Q9BTC0 2240 aaKnown RBP9.54□□□□□ -0.88
PFDN1-203ENST00000510217 A0A0G2JMM0 328 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 A0A1W2PPB8 328 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 A0A1W2PRS3 328 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 A8MT66 165 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 A8MVJ9 347 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 KIR3DP1A8MWS1 328 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 WWP2O00308 870 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 FOXE1O00358 373 aaPredicted RBP9.54□□□□□ -0.88
PFDN1-203ENST00000510217 CCL21O00585 134 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 ZNHIT1O43257 154 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 ASNA1O43681 348 aa9.54□□□□□ -0.88
PFDN1-203ENST00000510217 ZNF354AO60765 605 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms