RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 DOHHQ9BU89 302 aa12.23□□□□□ -0.45
DDX41-210ENST00000509576 UGT2B28Q9BY64 529 aa12.23□□□□□ -0.45
DDX41-210ENST00000509576 ROGDIQ9GZN7 287 aa12.23□□□□□ -0.45
DDX41-210ENST00000509576 DPH5Q9H2P9 285 aa12.23□□□□□ -0.45
DDX41-210ENST00000509576 SAYSD1Q9NPB0 183 aa12.23□□□□□ -0.45
DDX41-210ENST00000509576 QPCTLQ9NXS2 382 aa12.23□□□□□ -0.45
DDX41-210ENST00000509576 NUDT4Q9NZJ9 180 aa12.23□□□□□ -0.45
DDX41-210ENST00000509576 CNIH4Q9P003 139 aa12.23□□□□□ -0.45
DDX41-210ENST00000509576 B4GALT7Q9UBV7 327 aa12.23□□□□□ -0.45
DDX41-210ENST00000509576 BOKQ9UMX3 212 aaPredicted RBP12.23□□□□□ -0.45
DDX41-210ENST00000509576 ANK3Q12955 4377 aaKnown RBP12.23□□□□□ -0.45
DDX41-210ENST00000509576 C15orf38-AP3S2A0A0A6YYH1 394 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 A0A1B0GTL3 188 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 ANKRD33BA6NCL7 494 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 SYNDIG1LA6NDD5 238 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 HSPB2A8KAH6 182 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 SUPT3HB4E1H0 165 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 KERAO60938 352 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 SUPT3HO75486 399 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 HPNP05981 417 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 BMP7P18075 431 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 GDF1P27539 372 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 TIMP3P35625 211 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 GP5P40197 560 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 NAGLUP54802 743 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 MGAT2Q10469 447 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 HSPB2Q16082 182 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 KBTBD12Q3ZCT8 623 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 PAGE2BQ5JRK9 111 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 WIPI1Q5MNZ9 446 aaPredicted RBP12.22□□□□□ -0.45
DDX41-210ENST00000509576 RNF111Q6ZNA4 994 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 TEX9Q8N6V9 391 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 SRFBP1Q8NEF9 429 aaKnown RBP12.22□□□□□ -0.45
DDX41-210ENST00000509576 MYRIPQ8NFW9 859 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 FAM222BQ8WU58 562 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 TANKQ92844 425 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 RGMAQ96B86 450 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 GPR78Q96P69 363 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 KRT12Q99456 494 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 ANGPTL4Q9BY76 406 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 DDX31Q9H8H2 851 aaKnown RBP12.22□□□□□ -0.45
DDX41-210ENST00000509576 CXorf21Q9HAI6 301 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 NSMCE4AQ9NXX6 385 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 C15orf41Q9Y2V0 281 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 RNF11Q9Y3C5 154 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 TSC22D4Q9Y3Q8 395 aa12.22□□□□□ -0.45
DDX41-210ENST00000509576 MBD3L4A6NDZ8 208 aaPredicted RBP12.21□□□□□ -0.45
DDX41-210ENST00000509576 MBD3L3A6NE82 208 aaPredicted RBP12.21□□□□□ -0.45
DDX41-210ENST00000509576 MBD3L5A6NJ08 208 aaPredicted RBP12.21□□□□□ -0.45
DDX41-210ENST00000509576 C17orf51A8MQB3 221 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 SIAH2O43255 324 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 SIX3O95343 332 aaPredicted RBP12.21□□□□□ -0.45
DDX41-210ENST00000509576 CTAGE8P0CG41 777 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 COX7A2P14406 83 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 PTPN6P29350 595 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 HOXC12P31275 282 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 HPDP32754 393 aaPredicted RBP12.21□□□□□ -0.45
DDX41-210ENST00000509576 PIK3CBP42338 1070 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 CASP3P42574 277 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 SLC12A2P55011 1212 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 FUT7Q11130 342 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 RPS6KA2Q15349 733 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 NSUN5P2Q63ZY6 315 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 ZDHHC24Q6UX98 284 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 CHSY3Q70JA7 882 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 CTAGE4Q8IX94 777 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 MBD3L2Q8NHZ7 208 aaPredicted RBP12.21□□□□□ -0.45
DDX41-210ENST00000509576 PYROXD1Q8WU10 500 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 SLC44A1Q8WWI5 657 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 DIO2Q92813 273 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 RIT1Q92963 219 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 TSPAN17Q96FV3 270 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 RBM18Q96H35 190 aaKnown RBP12.21□□□□□ -0.45
DDX41-210ENST00000509576 ZNF597Q96LX8 424 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 NODALQ96S42 347 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 NXF5Q9H1B4 397 aaKnown RBP12.21□□□□□ -0.45
DDX41-210ENST00000509576 SLC24A3Q9HC58 644 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 OPTCQ9UBM4 332 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 NPFFR2Q9Y5X5 522 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 IKBKGQ9Y6K9 419 aa12.21□□□□□ -0.45
DDX41-210ENST00000509576 DSCAMO60469 2012 aa12.21□□□□□ -0.46
DDX41-210ENST00000509576 JMJD1CQ15652 2540 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 ROS1P08922 2347 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 IQANK1A0A1B0GTG1 560 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 C2orf72A6NCS6 295 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 AHRRA9YTQ3 701 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 OR7A17O14581 309 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 RAD51CO43502 376 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 NME6O75414 186 aaPredicted RBP12.2□□□□□ -0.46
DDX41-210ENST00000509576 HRGP04196 525 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 FAM58BPP0C7Q3 252 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 NR2F6P10588 404 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 CD53P19397 219 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 DNASE1P24855 282 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 SERPINB3P29508 390 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 POU4F3Q15319 338 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 NNATQ16517 81 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 HIST2H2ACQ16777 129 aaPredicted RBP12.2□□□□□ -0.46
DDX41-210ENST00000509576 DEFB113Q30KQ7 82 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms