RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 POU4F3Q15319 338 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 DUOXA1Q1HG43 343 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 UNC5DQ6UXZ4 953 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 LYSMD2Q8IV50 215 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 SLC35F3Q8IY50 421 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 GHDCQ8N2G8 530 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 SLC25A45Q8N413 288 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 OXR1Q8N573 874 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 TRPV3Q8NET8 790 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ENKURQ8TC29 256 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 DOK4Q8TEW6 326 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 MED30Q96HR3 178 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 LINC00615Q96LM1 132 aaPredicted RBP8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 CDADC1Q9BWV3 514 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 BEX1Q9HBH7 125 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 RAPGEFL1Q9UHV5 662 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ENPP5Q9UJA9 477 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ZNF225Q9UK10 706 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 MAGEB17A8MXT2 336 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 GPR89AB7ZAQ6 455 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ERVH48-1M5A8F1 160 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 SIGLEC6O43699 453 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ALX3O95076 343 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 INHBBP09529 407 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 GPR89BP0CG08 455 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 NPPBP16860 134 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 EVI2BP34910 448 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 DGKQP52824 942 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 EMX1Q04741 257 aaPredicted RBP8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ZNF404Q494X3 552 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 FLYWCH1Q4VC44 716 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ARMCX4Q5H9R4 360 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ZNF544Q6NX49 715 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 STON2Q8WXE9 905 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 BCL7BQ9BQE9 202 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 RBCK1Q9BYM8 510 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 OR2B2Q9GZK3 357 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 MVB12BQ9H7P6 319 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 AKTIPQ9H8T0 292 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 FKBP14Q9NWM8 211 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ATP6V1HQ9UI12 483 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 PILRBQ9UKJ0 227 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 SLC6A14Q9UN76 642 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 HEBP2Q9Y5Z4 205 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 EFCAB10A6NFE3 127 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 SLC9B1P1A6NJY1 282 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 NDUFS4O43181 175 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 PRAMEF4O60810 478 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 PLATP00750 562 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ALPPL2P10696 532 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 POU2F1P14859 743 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 AQP1P29972 269 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 CMPK1P30085 196 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 KRT20P35900 424 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 DNAJB13P59910 316 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 SLC9A5Q14940 896 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 SUZ12Q15022 739 aaKnown RBP8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 UGT8Q16880 541 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 PRAMEF9Q5VWM5 478 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 GUSBP11Q6P575 273 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 GDPD3Q7L5L3 318 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 NLGN4XQ8N0W4 816 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 DNASE2BQ8WZ79 361 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 FAM131CQ96AQ9 280 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 L3HYPDHQ96EM0 354 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 F2RL3Q96RI0 385 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 BARD1Q99728 777 aaKnown RBP8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 MAP3K3Q99759 626 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 IL1RAPQ9NPH3 570 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 PRMT8Q9NR22 394 aaPredicted RBP8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ACTR10Q9NZ32 417 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 ZNF222Q9UK12 451 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 PCDHGA10Q9Y5H3 936 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 GMPPBQ9Y5P6 360 aa8.23□□□□□ -1.09
LIMCH1-209ENST00000509277 PCNX2A6NKB5 2137 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 EVPLLA8MZ36 301 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 BCKDKO14874 412 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CAPN5O15484 640 aaPredicted RBP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 GDF9O60383 454 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PROS1P07225 676 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CAPN3P20807 821 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 ALAS2P22557 587 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PTGER1P34995 402 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 ARHGDIAP52565 204 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PPP5CP53041 499 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 OR4D2P58180 307 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 VSX2P58304 361 aaPredicted RBP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 OLR1P78380 273 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 ACSM2AQ08AH3 577 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 FAM98BQ52LJ0 330 aaKnown RBP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 ACSM2BQ68CK6 577 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 MED27Q6P2C8 311 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 TMIGD1Q6UXZ0 262 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CHMP1BQ7LBR1 199 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 LRRC70Q7Z2Q7 622 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CACTIN-AS1Q8N1I8 211 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 AMER2Q8N7J2 671 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 GPBAR1Q8TDU6 330 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 TMEM203Q969S6 136 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 C19orf43Q9BQ61 176 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms