RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 NTN1O95631 604 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 EGFP01133 1207 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 CD40LGP29965 261 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 CTSKP43235 329 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 RPE65Q16518 533 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 UBE2UQ5VVX9 321 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 TCTN3Q6NUS6 607 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 BCDIN3DQ7Z5W3 292 aaKnown RBP13.71□□□□□ -0.21
DDX41-208ENST00000507955 ZNF605Q86T29 641 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 TAGAPQ8N103 731 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 KCT2Q8NC54 265 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 RHOXF1Q8NHV9 184 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 APOBEC4Q8WW27 367 aaKnown RBP13.71□□□□□ -0.21
DDX41-208ENST00000507955 C16orf58Q96GQ5 468 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 IL4I1Q96RQ9 567 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 RNF167Q9H6Y7 350 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 DDX31Q9H8H2 851 aaKnown RBP13.71□□□□□ -0.21
DDX41-208ENST00000507955 ZCCHC3Q9NUD5 404 aaKnown RBP13.71□□□□□ -0.21
DDX41-208ENST00000507955 A0A1W2PQF6 199 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 ISM1B1AKI9 464 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 DPM1O60762 260 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 DNTTP04053 509 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 LIMS1P48059 325 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 SERPINB10P48595 397 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 SLC13A2Q13183 592 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 DOC2BQ14184 412 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 LRRC32Q14392 662 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 AGAP7PQ5VUJ5 663 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 SFTPA2Q8IWL1 248 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 OR2L3Q8NG85 312 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 MS4A6EQ96DS6 147 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 ZHX1-C8orf76Q96EF9 292 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 AMDHD1Q96NU7 426 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 ROGDIQ9GZN7 287 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 DCSTAMPQ9H295 470 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 C6orf106Q9H6K1 298 aaPredicted RBP13.71□□□□□ -0.22
DDX41-208ENST00000507955 C11orf16Q9NQ32 467 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 EQTNQ9NQ60 294 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 GIN1Q9NXP7 522 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 SLC17A4Q9Y2C5 497 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 HCN4Q9Y3Q4 1203 aa13.71□□□□□ -0.22
DDX41-208ENST00000507955 DNMT3AQ9Y6K1 912 aaPredicted RBP13.71□□□□□ -0.22
DDX41-208ENST00000507955 BTN3A3O00478 584 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 CCNB2O95067 398 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 ANXA8P13928 327 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 ITGA2P17301 1181 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 PKLRP30613 574 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 GRK3P35626 688 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 EIF2DP41214 584 aaKnown RBP13.7□□□□□ -0.22
DDX41-208ENST00000507955 LASP1Q14847 261 aaKnown RBP13.7□□□□□ -0.22
DDX41-208ENST00000507955 ATAT1Q5SQI0 421 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 ENPP7Q6UWV6 458 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 ACOT4Q8N9L9 421 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 PSMA8Q8TAA3 256 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 HPS1Q92902 700 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 CNRIP1Q96F85 164 aaPredicted RBP13.7□□□□□ -0.22
DDX41-208ENST00000507955 ZBED6CLQ96FA7 236 aaPredicted RBP13.7□□□□□ -0.22
DDX41-208ENST00000507955 PCBD2Q9H0N5 130 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 MVB12BQ9H7P6 319 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 ZNF556Q9HAH1 456 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 CCNB1IP1Q9NPC3 277 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 MS4A12Q9NXJ0 267 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 POFUT2Q9Y2G5 429 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 ARHGEF17Q96PE2 2063 aaPredicted RBP13.7□□□□□ -0.22
DDX41-208ENST00000507955 CLDN24A6NM45 220 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 PLRG1O43660 514 aaKnown RBP13.7□□□□□ -0.22
DDX41-208ENST00000507955 DNAJB6O75190 326 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 KLF8O95600 359 aaPredicted RBP13.7□□□□□ -0.22
DDX41-208ENST00000507955 RHCEP18577 417 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 CHMP24386 653 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 GADD45AP24522 165 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 ACSL1P33121 698 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 HSD17B2P37059 387 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 TMEM107Q6UX40 140 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 DNAJC22Q8N4W6 341 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 SIMC1Q8NDZ2 872 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 MCFD2Q8NI22 146 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 SLC38A4Q969I6 547 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 ZG16BQ96DA0 208 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 ITPAQ9BY32 194 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 SLC35C2Q9NQQ7 365 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 PRDM7Q9NQW5 492 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 SEC14L3Q9UDX4 400 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 APOBEC3BQ9UH17 382 aaKnown RBP13.7□□□□□ -0.22
DDX41-208ENST00000507955 PSORS1C1Q9UIG5 152 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 DUSP12Q9UNI6 340 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 TICRRQ7Z2Z1 1910 aa13.7□□□□□ -0.22
DDX41-208ENST00000507955 IFNA14P01570 189 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 HOXB2P14652 356 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 CBLP22681 906 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 NTSR1P30989 418 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 CNR2P34972 360 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 DMPKQ09013 629 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 TOR1AIP1Q5JTV8 583 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 COLEC12Q5KU26 742 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 OR2L8Q8NGY9 312 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 IPCEF1Q8WWN9 437 aaPredicted RBP13.69□□□□□ -0.22
DDX41-208ENST00000507955 OR1E3Q8WZA6 343 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 ABHD8Q96I13 439 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 BBS4Q96RK4 519 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 297.1 ms