RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 ATG4BQ9Y4P1 393 aa20.83■□□□□ 0.93
SPCS3-203ENST00000507678 SCN3AQ9NY46 2000 aa20.83■□□□□ 0.93
SPCS3-203ENST00000507678 SULT1C4O75897 302 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 ADH1BP00325 375 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 ADRA2AP08913 450 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 BMP4P12644 408 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 GABRB1P18505 474 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 IGFALSP35858 605 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 SERPINB10P48595 397 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 LSM11P83369 360 aaKnown RBP eCLIP20.83■□□□□ 0.92
SPCS3-203ENST00000507678 DCST1Q5T197 706 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 BCDIN3DQ7Z5W3 292 aaKnown RBP20.83■□□□□ 0.92
SPCS3-203ENST00000507678 OR51E2Q9H255 320 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 DDX31Q9H8H2 851 aaKnown RBP20.83■□□□□ 0.92
SPCS3-203ENST00000507678 SLC35C2Q9NQQ7 365 aa20.83■□□□□ 0.92
SPCS3-203ENST00000507678 A0A0A6YYD5 115 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 ISM1B1AKI9 464 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 NARSO43776 548 aaKnown RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 CNOT3O75175 753 aaKnown RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 CERS1P27544 350 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 HMGA2P52926 109 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 DUSP2Q05923 314 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 LRRC32Q14392 662 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 SLC9A5Q14940 896 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 ZNF607Q96SK3 696 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 BTBD1Q9H0C5 482 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 AKIP1Q9NQ31 210 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 DNMT3AQ9Y6K1 912 aaPredicted RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 DOCK8Q8NF50 2099 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 RNGTTO60942 597 aaKnown RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 ELAVL4P26378 380 aaKnown RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 ERVK-21P61565 698 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 RPS21P63220 83 aaKnown RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 ARMCX4Q5H9R4 360 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 KIAA1161Q6NSJ0 714 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 TMEM107Q6UX40 140 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 WDR53Q7Z5U6 358 aaPredicted RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 SLC30A8Q8IWU4 369 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 DENND6BQ8NEG7 585 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 OR4E2Q8NGC2 313 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 APOBEC4Q8WW27 367 aaKnown RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 CHCHD6Q9BRQ6 235 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 C6orf62Q9GZU0 229 aaPredicted RBP20.82■□□□□ 0.92
SPCS3-203ENST00000507678 TPK1Q9H3S4 243 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 SACM1LQ9NTJ5 587 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 DNAJC27Q9NZQ0 273 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 P2RX2Q9UBL9 471 aa20.82■□□□□ 0.92
SPCS3-203ENST00000507678 EPOPA6NHQ4 379 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 TNNI3P19429 210 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 TARDBPQ13148 414 aaKnown RBP eCLIP20.81■□□□□ 0.921e-7■■■■□ 20.6
SPCS3-203ENST00000507678 TBCEQ15813 527 aaPredicted RBP20.81■□□□□ 0.92
SPCS3-203ENST00000507678 ITPRIPL2Q3MIP1 535 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 TOR1AIP1Q5JTV8 583 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 ZNF776Q68DI1 518 aaPredicted RBP20.81■□□□□ 0.92
SPCS3-203ENST00000507678 NUDT18Q6ZVK8 323 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 KIAA1958Q8N8K9 716 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 OR5M11Q96RB7 305 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 PRR14Q9BWN1 585 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 MVB12BQ9H7P6 319 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 FGF22Q9HCT0 170 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 ALPK3Q96L96 1907 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 CLEC3AO75596 197 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 H1F0P07305 194 aaKnown RBP20.81■□□□□ 0.92
SPCS3-203ENST00000507678 AK4P27144 223 aaPredicted RBP20.81■□□□□ 0.92
SPCS3-203ENST00000507678 NTSP30990 170 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 RCVRNP35243 200 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 BUD31P41223 144 aaPredicted RBP20.81■□□□□ 0.92
SPCS3-203ENST00000507678 TRIM16LQ309B1 348 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 IQCF1Q8N6M8 205 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 MCFD2Q8NI22 146 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 C16orf58Q96GQ5 468 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 ZNF354BQ96LW1 612 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 TRPV4Q9HBA0 871 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 PLCXD1Q9NUJ7 323 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 OBP2AQ9NY56 170 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 FTSJ1Q9UET6 329 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 PRUNE2Q8WUY3 3088 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 A0A1W2PR48 441 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 H0Y8X5 98 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 PKLRP30613 574 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 TMEM31Q5JXX7 168 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 ZNF770Q6IQ21 691 aaPredicted RBP20.81■□□□□ 0.92
SPCS3-203ENST00000507678 ACOT4Q8N9L9 421 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 UCK2Q9BZX2 261 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 SLIRPQ9GZT3 109 aaKnown RBP20.81■□□□□ 0.92
SPCS3-203ENST00000507678 CD93Q9NPY3 652 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 POLE4Q9NR33 117 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 GIN1Q9NXP7 522 aa20.81■□□□□ 0.92
SPCS3-203ENST00000507678 DENND4AQ7Z401 1863 aa20.8■□□□□ 0.92
SPCS3-203ENST00000507678 POM121BA6NF01 834 aa20.8■□□□□ 0.92
SPCS3-203ENST00000507678 EML2O95834 649 aa20.8■□□□□ 0.92
SPCS3-203ENST00000507678 DNTTP04053 509 aa20.8■□□□□ 0.92
SPCS3-203ENST00000507678 KCNJ5P48544 419 aa20.8■□□□□ 0.92
SPCS3-203ENST00000507678 RPS3AP61247 264 aaKnown RBP20.8■□□□□ 0.92
SPCS3-203ENST00000507678 GPAT3Q53EU6 434 aa20.8■□□□□ 0.92
SPCS3-203ENST00000507678 SLC7A13Q8TCU3 470 aa20.8■□□□□ 0.92
SPCS3-203ENST00000507678 FCGR1BQ92637 280 aa20.8■□□□□ 0.92
SPCS3-203ENST00000507678 MS4A6EQ96DS6 147 aa20.8■□□□□ 0.92
SPCS3-203ENST00000507678 MAPKAP1Q9BPZ7 522 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms